Sphingobium chlorophenolicum: Sphch_0294
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Entry
Sphch_0294 CDS
T01522
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sch03009
]
Sphch_0294
Enzymes [BR:
sch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Sphch_0294
Ribosome biogenesis [BR:
sch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sphch_0294
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEG47994
UniProt:
F6EVJ0
LinkDB
All DBs
Position
1:299863..301161
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AA seq
432 aa
AA seq
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MKGRPPGKSSGPRKSGDAPRGRARGAVKAARARKPDASKPGPKAAAVKPVIAKPTKPSPA
KGVSLDVRQFRVGADDDGIRLDRWFQRHLPDVGFNTVSRWARTGQLRVDGARAAPGDRIA
EGQSIRVPPAEPKAAETAKPKRVRPQLTDDQIAFAQGIVIHRDAQAIVINKPPGLATQGG
TKTDDHVDGLLDALEYELDQRPKLVHRLDKDTSGALLIARTARSAAFFAKAFSSRTARKV
YWAIVMGVPSIEDGMVELPIAKQPGTGGEKMHVDEEEGLPSRSRYRVIERAGNRAAWVEL
QPYTGRTHQLRVHMAAIGHPIVGDGKYGGKEAFLSGTISRKMHLHARRIRVDHPDGGRVD
VRAELPEHFAASLASLGFDLSTGDLPLDEEIARAPTREDEKKAARAHAKQIRKGRKGERR
ARGSGGGARKKP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcgtcctcccggcaaatcctccggcccgcgcaagtccggcgacgctccccgg
ggccgtgcgcggggcgccgtcaaggctgctcgcgcccgcaagccggacgcgtccaagccc
ggtcccaaagcggctgccgtcaagcctgtcattgccaagccaaccaagccatcccctgcc
aagggcgtttcgctggatgtccggcagttccgcgtcggcgcggacgatgacggcatccgg
ctcgaccgctggttccagcggcatctgcccgatgtcggcttcaacaccgtctcgcgctgg
gcccgcaccggccagttgcgcgtggacggtgcccgcgccgcgcccggcgaccggatcgcg
gaaggccaaagcatccgcgtaccccccgccgaacccaaggccgccgagaccgccaagccc
aagcgcgtccgtccgcaactgaccgacgatcagatcgccttcgcccagggcatcgtcatc
caccgggacgcgcaggcgatcgtcatcaacaagccgccgggccttgccacccagggcggc
acgaagaccgacgatcatgtcgacggcctgctcgacgcgctggaatatgaactcgaccag
cgcccgaagctggtccaccggctcgacaaggatacctccggcgcgctgctgatcgcccgc
actgcccgctcggcggcctttttcgccaaggccttttccagccgcacggcgcgcaaggtc
tattgggcgattgtcatgggcgtcccctccattgaggacggcatggtcgaactgcccatc
gccaagcagcccggcaccggcggcgagaagatgcatgtggatgaggaggaggggcttccc
tcccgctcccgctatcgcgtgatcgagcgggcgggtaatcgcgctgcctgggtggagctg
caaccctataccggccgcacccaccagttgcgcgtccatatggcggccatcggccatccc
atcgtcggcgacggcaaatatggcggcaaggaagcctttctgagtggcacgatcagccgc
aagatgcaccttcatgcccgccgcatccgcgtcgatcatcccgatggcggccgggtcgac
gtgcgcgccgaactgccggagcatttcgccgccagccttgcctccctgggtttcgacctg
tccaccggcgacctgccgctggacgaggagatcgcccgcgcacccacgcgtgaggatgag
aagaaggccgcccgcgcccatgccaagcagatccgcaagggccgcaaaggcgaaaggcgc
gcgcgcggctccggcgggggcgcgcgcaagaagccatga
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