Staphylococcus chromogenes: DWB92_07425
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Entry
DWB92_07425 CDS
T06648
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
schr
Staphylococcus chromogenes
Pathway
schr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB92_07425 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schr03019
]
DWB92_07425 (rny)
Messenger RNA biogenesis [BR:
schr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DWB92_07425 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Glt_symporter
Phage_holin_6_1
Motif
Other DBs
NCBI-ProteinID:
QDW82531
LinkDB
All DBs
Position
complement(1504002..1505561)
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AA seq
519 aa
AA seq
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MNLLSLLLILLGIILGVVVGYLIAQYLIHQKQIQARNTADDIIEQANKEAENLKKEKLIE
AKEENQILRERADSELRERRGELQRQESRLLQKEENLERKSDLLDKKDEILEQKESKLEE
RQQHVDAKESSVQSIIMKHEQELERISGLTQEEARQEQLARVEDELSQDIAILVKEKENE
AKEQVNQKAKELLATAVQRFAADHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIAKTALINLVSDGRIHPGRIEDMVEKARRDVDEIIRD
AGEQATFELNIHNMHPDLVKILGRMHYRTSYGQNVLKHSIEVAYLSGMLAAELDEDVTLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGESETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIKRLERLERISESYDGVDKAFAIQAGREIRVMVSPEDIDD
LKAHRLARDIKNQIEDELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaagcctcttactcattttgctgggtatcattctaggagttgttgtaggg
tatctgattgcccaatatttaatacatcaaaagcagattcaagcacgaaatactgccgac
gatattattgaacaagccaataaagaagcagagaatctcaaaaaagaaaagttgattgaa
gctaaagaagaaaaccaaattctaagagaacgcgctgatagcgagcttagagaacgacgt
ggtgaacttcaaaggcaggaatcccgacttcttcaaaaagaagagaacttggagcgaaaa
tctgatcttttagataaaaaggatgagattttagagcaaaaagaatctaaacttgaagaa
agacaacaacacgtagatgcaaaagagagtagtgttcaatctataataatgaagcacgaa
caagaactagaacgcatctccggtctcactcaagaagaagcacgacaagaacaattggcg
cgtgttgaagatgagttgtcacaagatattgcaatattggttaaagaaaaagaaaacgaa
gcaaaagaacaagtcaatcaaaaagcgaaagaattacttgcaaccgcagttcaacgtttt
gctgctgatcatacttcagaatcaacggtttctgtggtaaatttacctaatgacgaaatg
aaaggtcgtatcatcggtcgtgaaggccgtaacatacgtacccttgaaacattgacaggt
attgatttgattatcgatgatactccagaagcagtgattttatctggatttgatccaata
cggcgagaaattgctaaaactgctttaattaatctcgtatctgatggacgcattcatccg
gggcgtattgaagatatggttgaaaaagcacgtcgagatgttgatgaaattatacgtgat
gcaggtgaacaagcgacatttgaattaaatattcataatatgcatccagatttagttaaa
atattaggtcgtatgcattaccgtacaagctatggtcaaaatgtgcttaaacactccatt
gaagtggcttacttatctggtatgttggctgccgaacttgatgaagacgtgacactcgca
aaacgagcaggacttctgcatgatgttggtaaagcgattgaccatgaagttgaaggcagt
cacgtagaaatcggtgtcgaattggcgaaaaaatatggtgaatctgaaacagtgattaat
gcgattcattctcatcatggtgatgttgagccgacgtcaattatttctattttagttgca
gctgcagatgctctatcagcagcaagaccaggtgcaagaaaagaaacattagaaaattat
attaaacgtttagaacgacttgaacgcatttctgaaagttacgatggcgttgataaagca
tttgctatccaagcaggccgtgaaatacgtgtgatggtttcacctgaggatatcgatgat
ttgaaagcccatcgtttagcaagagacatcaaaaaccaaattgaagatgaattacaatat
ccaggtcatatcaaagtgacagtcgtacgtgagacgagagcaatagagtatgcaaaataa
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