Siniperca chuatsi (mandarin fish): 122863494
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Entry
122863494 CDS
T08948
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04217
Necroptosis
schu04622
RIG-I-like receptor signaling pathway
schu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122863494 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122863494 (cylda)
04625 C-type lectin receptor signaling pathway
122863494 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122863494 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122863494 (cylda)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122863494 (cylda)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C67
122863494 (cylda)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122863494 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
122863494
NCBI-ProteinID:
XP_044026027
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All DBs
Position
LG1:complement(27238595..27262357)
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AA seq
956 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVHVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDEDLGKLEVDHVNLVEEDQDFPPLEINSRVLVQTR
DGPERGTIIFCDQLPGNESLGYYVGVDMDNPIGDWDGVFDGKLLCNFASLEHTRLVPICD
VMPEYSMQDQRLQKHSFAPRGTNSDKSSSGQSKPKSKGLSHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPTASLSSDNKFHSLPFSL
NRKTGPIDSMSHGPLSLSVQSVMGEQPEPPSPAAPLSPRPPTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLQEALAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKTHRHGKLSV
PKELQEGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSQTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgt
ttctacatggtcgtaaaggagtgtacggtggagaaacctccccagaagaccctgaggatc
ccccgtggcagtctcggtcaggcctgccaggagcgcaacagcctggggcgaacactgccc
ccatgcaagggcaaaaaaagcctccgcatcctggaccagaccaacgtggtgctgagcctg
gacgagcgggacgtcctggagctggatgagaagttggctgagctgctgttccccattacc
aactgtgaggagcgatatgccctgctctgcaacaagtcacggctagagcgcgtccgtgat
attgactgtggttcaaaggtgcacgtccagctgcgctcaggggatgaacctctgcctggt
gtggtccgcttcaagggctcactgctccctgacagagccctctctgggatctggtttgga
gtggagctgctggaggagggccgtggccagggcttcacagagggctcctatcagggccgc
caacttttccgctgtgaggatgagtgcggtgtgtttgtggccctggacaagcttgaactc
tgggaggatgatgatgacgaagacttgggcaagctggaggtggaccacgtcaacctggtg
gaagaggaccaggacttccctccactggagatcaactccagggtcctggtgcagaccagg
gacggaccagagagaggcacaatcattttttgtgaccagctgccaggcaacgagagcctg
ggctactatgtgggagttgacatggacaatcctatcggggactgggatggcgtgtttgat
gggaagttgctgtgtaattttgccagtttggagcacactcgactcgtccccatctgtgac
gtaatgccagaatattccatgcaggaccaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgacaagtcatcctctggccaaagcaaaccaaagagcaaaggattaagt
catcagtgtggcagtagaagcaagtctgaattttactatactttaaatggcagctctgtt
gatccccccgcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cccgccaagtcacttactgacacgccccctgacttcaaccagtcctccccaccctccaga
gccccgcccactgcctcgttgtccagtgacaacaagttccactctctgcccttcagcctg
aaccggaagaccgggcccatcgacagcatgagccatgggcctctctccctttctgtccag
tcggtgatgggagagcagcccgagcccccatcacctgctgcccctctctcaccgcggcct
cccacacctcccagaggacagccaggtctggaggtgggctctctggtggaggtgaaggag
aacccccctctgtgtggtgtcatccgctgggtgggtctgcctcctggcctgcaggaggct
ttggctgggctggagctggaggaagagtgccctggctgcactgatggcaccttcaaaggt
acgcggtacttcacctgcccacccaaaaaagccctgtttgtaaagctcaagtgctgccga
cccgactcccgcttcccgtccctgcatcactcctccaaccccatagagcggtgcaactcc
atcgcatttgggggttacctaagtgaggtagtacacgagaacacgcctccccgcacagag
aatgatggtctggatgtcatggttggaaaaaagaaaggcatccagggccactacaactcc
tgctacctggattcaaccctcttctgtcttttctccttcagctctgtactggacacggtt
ctgctgaggccacgctcgaagactgatgtggagtattacagagagacccaagagctgtta
cgcacagagatagtcaaccctctgcgcatacatgggtatgtttgtgccactaaagtgatg
aagctaaggaggatcctggagaaagtagaagctgcctctgggtttacctctgaagaaaaa
gatcccgaggagttcctcaatatccttttccatcatatactgagggtggacccgttgctc
aagctaaggtcagcaggacagaaggtccaggactgttacttttaccagatctttatggac
aagaaggacaaggttggagttcccaccatccagcagctcctggaatggtccttcatcaac
agcgacctaaagtttgctgaggctccctcctgccttatcatccagatgccccgctttggc
aaggacttcaaaatgttcaacaagattttcccctcactagagttagacatcacagacctt
cttgaagacactccaagggaatgtcgaatctgtggaggcctggctctctacgagtgtcga
gactgttatgaggacggggatatcactgctggcaagattaaacagttctgtgaaaagtgc
aatacacaggttcacctccacccgaggaggaaaacccatcggcacggcaaactgtccgtc
ccgaaggagctgcaagaaggtacggggcggcagggcagttttccccgccagaggatggag
ctgttcgccgtactgtgcatagaaaccagtcactacgtggccttcgtcaagtacggcagc
gcagattccgcctggctcttcttcgacagcatggctgaccgtgatggagggcagaacggt
ttcaacatcccccaggtgtctccctgtccggaggtggaggcctacctgaaaatgaccccg
gaggagctgcacgccctggatcccaagagcatccagggccaggcccgacgccttctgtgc
gatgcctacatgtgcatgtaccagagccagaccatgagcctgtacaagtag
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