Siniperca chuatsi (mandarin fish): 122865415
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Entry
122865415 CDS
T08948
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122865415 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122865415 (trim32)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122865415 (trim32)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122865415 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
zf-RING_4
Baculo_IE-1
zf-RING_11
Prok-RING_4
Sina_RING
GIY_YIG_2
Haem_bd
DUF2203
Motif
Other DBs
NCBI-GeneID:
122865415
NCBI-ProteinID:
XP_044029749
LinkDB
All DBs
Position
LG18:complement(11297663..11303811)
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AA seq
684 aa
AA seq
DB search
MEAASSQLDPELIREVLECPICLETYNQEQMRPKLLQCGHTVCRQCLEKLLANTINGVRC
PFCSKVSRMSNISQLADNLTVLKILDCTTSCSAAAAALMCKSCCNRLPRQYCHDCATVLC
ELCKGEGHLHQGHSVQPIRVAAEQRRKELGGKLTTLRDVMGEIQKKKTAIENISKSLRLK
YQVVHQDYTTAELRLQEELKRSRRAFTASMAEVEKLNGQVLEEQTYLLNIAEVKVLSRCD
YLTMLVRQSDIALLKDDGGGSDDEELDLRSSLPTMFKLQEPELVRKEHSKPVEVGQLTTN
TFTVNTDDEASQLEMALEGDVESVAGVVGAIGGARGAPMDIYRDIDMVAAEEAVCGSPGS
FKSKSMDAGGGSPGGAGTSAGPPVCQFVKKMGCKGTLPGMFNLPVSICVTSQGEVLVADR
GNYRIQIFNRKGFQREIRRNASSIDNFVLSFLGADLPNLIPLSIAVTPQGLIGVTDNYDN
SVKVYTMDGHCVACHKNQLIKPWGITAMPSGQFVVSDVEGGKLWCLAVDRNVGVVSYNRL
CSAVRPKFVTCDAAGTVYFTQGLALNFEKRHNEPHLEGGFSIGSVDTDGQLGKQLSHFFS
ETEDFRCITGMCVDANGDLLVTDSGRKEILQFPKEGGFKILIQEGLTCPVGVATTQKGQL
LVLDCWDHCVKVYTYIQRRHSSTS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcatcttcccagctggacccagaactaattagggaggttcttgaatgccct
atatgcctggagacctacaaccaggaacaaatgagacccaaactcctgcagtgtggtcac
acagtgtgcaggcagtgtctagagaagctgttggctaatactatcaatggtgtgcgctgc
cccttttgtagcaaggtctcccgtatgagcaatatctcccagctggccgataatctaact
gtgctcaagatcctagattgtactacatcctgcagtgctgctgctgctgccctaatgtgc
aagtcctgctgcaaccgcctaccacgacagtactgtcatgattgtgccacagtcctctgt
gagctctgtaaaggggagggccacctgcatcaaggccattcagtccagccgattagggtg
gctgctgaacagcgtcgtaaagaactgggtggcaagctgactactttgcgtgatgttatg
ggtgaaattcagaagaaaaagacagctattgaaaacatttccaagtctttgagactaaag
taccaggtagtgcaccaggactatactacagctgagctacgtcttcaagaggagctcaag
aggtctcgaagagcattcacagcgtccatggcagaagtagaaaagctaaatgggcaggtc
ctggaggagcagacatatctccttaacattgcggaggtgaaagtgttgtcacgctgtgat
tatctgacaatgctggtgaggcagagtgatatcgctttgctgaaggatgatggcggaggc
agtgatgatgaagagctggatctgaggagcagcttacccaccatgtttaagctgcaagag
ccagaactggtcagaaaagaacactctaaacctgtagaagtgggccaattgaccacaaat
acttttactgtcaatacagacgatgaggcgagtcagctggagatggcacttgaaggtgat
gtagagagtgtagctggagtagtaggggctataggtggtgcaaggggggctccaatggat
atttacagagacattgacatggttgcagctgaggaggcagtatgtggttcaccaggcagc
tttaagtcaaaatccatggatgcaggcgggggatcacccggaggagctggaacaagcgca
gggcccccagtctgccagtttgtgaagaagatgggctgcaagggaactttacctggcatg
ttcaatttaccagtcagcatctgtgtaacatcacaaggtgaggtcctggtagctgaccgt
ggcaactaccgcatccagatcttcaatcgcaaaggtttccagcgtgaaatccgccgcaac
gctagtagcatcgacaactttgtcctgagcttccttggggctgacttgcctaacctcatc
cccttgtccattgctgtcactcctcaaggcctgattggcgtcactgacaactacgataac
tcagttaaagtctacactatggatggacactgtgtggcttgccataagaaccagctgatt
aaaccctggggcattactgccatgccgtcaggtcagtttgtggtgtcagatgtggaaggt
ggcaagctgtggtgtctagcagtggaccgcaatgtaggtgtggtcagctacaacagattg
tgctctgctgtgcggccaaagtttgtgacatgtgatgcagctggaacagtctatttcacc
cagggcctggccctgaactttgagaaacgccacaatgaaccccacctggagggtggcttc
tctattggctcagtggatactgatggccaactaggcaagcagctcagccattttttctca
gagacagaggacttccgctgtatcactggcatgtgtgtggatgccaatggggatttgctg
gtaacggacagtggcaggaaagaaatcctccagtttcccaaagagggtggattcaaaatt
ctcatccaggaagggctgacctgccctgtgggagtggccaccacccagaaaggacaactg
ctagtgctggattgttgggaccactgtgttaaagtctacacatacattcagaggaggcac
tcctccacttcctag
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