Siniperca chuatsi (mandarin fish): 122865505
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Entry
122865505 CDS
T08948
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122865505
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122865505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_6
zf-RING_5
Prok-RING_4
zf-RING_11
DivIC
Motif
Other DBs
NCBI-GeneID:
122865505
NCBI-ProteinID:
XP_044029956
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All DBs
Position
LG18:complement(22646808..22649466)
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AA seq
551 aa
AA seq
DB search
MDQKKLCCSICLDLLKDPVTIPCGHSYCMNCIKSHWDEEDQKKIHSCPQCRQTFRPRPAL
VKNTVLTDLVEELEKTGLQAAPADHCYAGPEDMSCDVCTGRKLKAIKSCLQCLVSYCEQH
LQPHYESPAFEKHKLVGPSKELQKIICSHHGKAMKIFCRTDQQCICYLCSMDEHKDHDIV
LASAERSRRQRELATSRQRIQQRIQDIEIDVKALQQEVRAISCSADKAVKNSEKLFAQLV
RLIKNRSSDVKQQIRSRQKTEVSRATDRQEKLQQEITKLRKKEAELERLSHTEDHTRFLH
NYPFLSCLSESTDSPSIKICPLLYFKDVTAAVSEVRDKLQDILSEVWTKISLTETGVDVL
LPQAEPRTRAEFLQCSCQITLDPNSANTQLLLSEGNRKATVTNEKQLYSSNQDRFTDMFQ
VVSRESLSRRHYWEVERSRHEVSVAVTYKDISRTGYESGFGNDDKSWALECFNNNYEFRH
NSIGTFIAGPQSSKIGVYLDHMAGILSFYSVSETMTLLHRVQTTFTQPLYHGLGVFGSHG
NGPAAEICKLK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaaaaaactttgctgttcgatctgtttggatctactgaaggatccagtgact
attccctgtgggcacagctactgcatgaactgtattaaaagccactgggatgaagaggat
cagaagaaaatccacagctgccctcagtgcagacagaccttcagaccgagacctgccctg
gtgaaaaacactgtgctaacagatttagtggaggagctggagaagacaggactccaagct
gctccagctgatcactgctatgctggacctgaagatatgtcctgtgatgtctgcactggg
agaaagctgaaagccatcaagtcctgtctgcagtgtctggtctcttactgtgagcaacac
ctccagcctcactatgaatcccctgcctttgaaaaacacaagctggtcggcccctccaaa
gagcttcagaagatcatctgttcacaccatggtaaagcgatgaagattttctgccgcact
gatcagcagtgtatctgttatctgtgctccatggatgaacataaagaccacgacattgtc
ttagcctcagcagaacggagtaggaggcagagagagctcgcaacgagtcgacaaagaatc
cagcagagaatccaggacatagagattgacgtgaaggcgcttcagcaggaggtgagggct
atcagttgctctgctgataaagcagtgaagaacagcgagaagctcttcgctcagctggta
cgtcttatcaagaacagaagctctgatgtgaagcagcagatcagatcccggcagaaaact
gaagtgagtcgggccacagaccgtcaggagaaactgcagcaggagatcaccaaactgagg
aagaaagaagctgagctggagcggctctcacacacagaggaccacacccggtttctacac
aattacccctttctgtcatgtcttagtgaatctacagactcacccagcatcaaaatctgt
cctctgctatactttaaggatgtgacagcagctgtgtcagaggtcagagacaagctacag
gacattcttagtgaggtatggaccaagatctcactgacagagactggagtggatgtttta
ctgccacaagcagagcccaggaccagagctgaattcttacagtgttcatgtcaaatcaca
ctggatcccaactcagcaaacacacagctgttattatctgaagggaacagaaaagcaacc
gtgacgaatgaaaaacagttatattctagtaatcaagacagatttactgacatgtttcag
gtcgtgagtagagagagtctgagcagacgtcactactgggaggtggagagaagcagacat
gaagtttcagtagcagtcacatacaaggatatcagcagaacaggatatgaaagtggattt
ggaaatgatgacaagtcttgggcattagagtgttttaacaacaattatgaattcagacat
aacagtattggcacttttatcgcaggccctcagtcctccaaaataggagtgtacctggat
cacatggcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacaga
gtccagaccacattcactcagccactctatcatggacttggtgtttttggttcacacggt
aatggacctgctgctgaaatctgtaagcttaagtag
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