Siniperca chuatsi (mandarin fish): 122870588
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Entry
122870588 CDS
T08948
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122870588
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122870588
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
SPRY
PRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_6
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122870588
NCBI-ProteinID:
XP_044040832
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Position
LG22:16554230..16559030
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AA seq
559 aa
AA seq
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MAEQERSVDLDQNQFCCSVCLDLLKEPVTIPCGHSYCKSCIEGCWDQREEKGTYSCPQCR
ETFSPRPVLRRNNMLAEVVEMLKRTSTQQAAPPAAVACAGPEDVACDFCCGKRNKATTSC
LTCLASYCPAHLEPHYSVPVLKKHQLVSATIPLQEKMCTKHNKLMEVYCQTDKKCICYLC
IIDEHKSHRTVSAAAERAEKEEQLIEKQMEVQERFQEREKELDELVQALKDFKSCSQTAV
ETSDEIFDELISSIKKKHTLVKELIKARERTAVAQAEELQLQMEEEITKLRRRDTELEQL
SHVDDHILFIQTFQSLSTSCESPDLPSGRVVRPQSWFKTVTDCLSKLRADIESLLQVTGP
RISATVSTIDVVLPPVPKTREEFLSYCCPLTLDENSVHRYLSLSHEFRRVKSEYYERCYS
AHSDRFMNVRQVLCREGLSERCYWEVSGSGCTWSVAVSYKDISRSSSHDSEYGKNNKSWR
LECSPDGYSFQHNNGRTTVSGPQSSRIGVFLDYKAGTLSFYSISDTMTLLHKAHATFTQP
LYPGLGLKGGGYAELIDYL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaggagcgcagcgtggatttggaccagaatcagttttgctgttcagtatgt
ctggacctgttaaaagagccagtcaccattccctgtggacacagttactgtaaaagctgt
attgagggatgctgggaccagagagaggagaagggaacgtacagctgccctcagtgcagg
gagaccttcagtcccaggcctgttctgaggaggaacaacatgctggctgaggttgttgag
atgttaaagagaacaagcacccagcaggctgctccccctgctgctgtggcctgtgccggc
ccggaagatgtcgcctgtgatttctgctgtgggaaacgaaacaaagccacgacgtcttgc
ctgacgtgtttggcatcttactgtccagctcacctcgagcctcactacagtgttccggtg
ttgaagaagcaccagctggtctcggctacaatccccctacaggaaaagatgtgtacaaag
cacaacaagctgatggaggtctactgccagacagacaagaagtgtatctgctatctgtgc
attatagatgagcataaaagccaccgtacagtgtcagctgcagcagagagggctgagaaa
gaggaacagctgattgagaagcaaatggaagtccaggagagattccaggagagagaaaag
gagctggatgagctggtccaggctctgaaggatttcaagagttgtagccagactgcagtg
gagaccagtgatgagatctttgatgagctgatctcctccataaagaaaaaacacactttg
gtgaaggagctgatcaaagcccgggagaggactgcagtcgctcaggctgaagagctgcag
ctgcagatggaggaggagatcaccaagctgaggaggagagacaccgaactggaacagctt
tctcatgtggacgaccacatccttttcattcagactttccagtccctctccacctcctgt
gaatctccagacttgccttcaggtcgcgttgttcgtccccaaagttggttcaaaactgtg
actgactgcttgtccaagctgagggctgacatagagagcctcctgcaggtgacggggccc
aggatctctgccacagtgtctactatagatgttgtgctgccacctgtgccaaagaccaga
gaagagtttttaagctattgctgtcctctaacactggatgagaactcagtccacagatac
ttgtccctttcacatgaattccggcgggtgaagagtgaatactacgaaagatgttattct
gctcactcagacaggtttatgaatgtcaggcaggtgttgtgcagagagggtttgtcagag
cgttgttactgggaggtgagtggcagtggttgtacttggtcagtggcagtgtcatacaaa
gacatcagcagatcatcgtcacatgactcagagtatggaaagaataacaagtcgtggcgt
ttagagtgctccccagatggttactctttccaacacaacaacggaagaacaacagtatca
ggccctcaatcctccaggatcggagtgttcctggattataaggcaggtactctgtccttt
tatagcatctctgacacgatgactctgctccacaaagcacacgccaccttcacccagcct
ctctatcctggccttgggctgaagggtggtggatatgcagaactgattgactacttgtga
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