Siniperca chuatsi (mandarin fish): 122873236
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Entry
122873236 CDS
T08948
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122873236
Membrane trafficking [BR:
schu04131
]
Protein recycling
Others
Others
122873236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
ChitinaseA_N
SHOCT
Motif
Other DBs
NCBI-GeneID:
122873236
NCBI-ProteinID:
XP_044045610
LinkDB
All DBs
Position
LG3:complement(30586993..30787283)
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AA seq
1373 aa
AA seq
DB search
MWLRGEIKEQQNKMTALLTALIIADHMVENNKYGERQSNIILHRSLWILSSSPMRAGLHL
IKSFNLDQYAQPHFLQHCIWATPQLAQHFLFHSRAAFYTPRGQREEWGNGLFSSTASFSA
SAMEREVIFCPKWHSAFSFLLLLCFFHAAKAEITCRSCQPGNMWRARELLLKFDRSETAT
GLKGEVFGHGDGTGRFGAASAESRRLRCVAGSAECPPDRTEYTEPRLKRNNVTDSLHAKG
EIGESEFAKMKVSYVSMSGQQKASYGAGFTSATRYRKRARRNSDDNKVRSPGSAQSQDPG
EGVSSAAGRRVTRSELRLSGEERRAAGPRQEELKLNSSTFALTGDSSHNQAMVHWSGQNS
SVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLYVSPNNKRKIML
LTDPEVESSLLISADEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRR
WQLVHEGVAPNRFYWSKMGLDKEPGLIHLETSISEGQSLYVTCKLQNCTDANKGKPFPGY
IDPNSLVVQDEYVFVQVSTTGRPIYYVSAKRDVFTPMKLPKYTLPKDLHVISTDENRVVA
AVQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLANQKA
DNQVKTHITYNRGRDWRLLQAPSKDLRGNSIHCVLPYCSLHLHLHVSANPYTSGNIASRD
SAPGIIVASGSIGAELTTSNVSVFITSDAGNTWRQIFDEEYAVLYLDQGGALVAIRHTPL
PIRHLWLSFDEGQQWNKYSFTNTPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDF
RSIFNRRCTEADYQTWHLHNQGDPCLMGVKRIYRKLKPTSRCVMGKMYSVSMTSGPCDCT
EADFECDYGYERRTNGKCTPAFWFHPSSMSRSCTTGMTFLNSTGYRKVVSNNCTAGVSME
YTARRQQCPIQAPKGLHLVTSEGTLTAILGTNVTFLVFLEEGDGARTSITLDFGDGHALT
YSNVSSIEDGIKHIYKAVGIYRVTATGENSLGSETTMLYLHVTCQLEYIHLSAPFVAVRN
KEVNLTAVLWPSQVGTVTYIWWIGNNTEQPVITLEGSVACTFSREGISTVTVQVSAGNAI
LQDRKNIAVHDYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIKNSLIQATGVREDQLLVT
ILPGLPTAAEFFLLPDKQLTEGKPEKSSAHLDQLSEVLLSTLNQNLVQFTLRPGVQVTVY
AAHLSAAPLVDTSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLNVYAQMQNEKEQE
MSPANPTEATPSSQRDLVHSLEILDTEFNSRPIGYMKPHVHVKFSTELPTYIV
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgagaggagaaataaaagagcagcagaacaaaatgactgcattactgactgca
ttaattatagccgaccatatggtggaaaataacaaatatggagaaagacagtccaacatt
atcctccatcgctcactatggatcctcagctcctcccccatgcgtgcggggcttcatttg
atcaaatccttcaacttggaccaatatgctcagccgcactttttacaacactgcatttgg
gcaacgccacaacttgcgcagcacttcctcttccacagccgagcggcattttacaccccg
agagggcagagagaagagtggggaaacggacttttttcatccacagcatccttctctgcc
tcagcaatggagagggaggtcatattttgcccaaagtggcacagtgcgtttagttttttg
cttttgctctgtttctttcacgccgccaaagctgagataacttgtaggtcatgccagcct
ggaaatatgtggcgtgcacgggaattactgctgaaattcgacagaagtgaaaccgcaaca
ggattaaagggagaagtttttggacatggagatgggacagggagattcggggctgcaagt
gctgaaagtcggcggctccgttgcgtagctgggtccgctgaatgccctccagatcggacg
gaatacacggagccaaggctgaaacggaataacgttacagacagcctgcacgcaaaaggc
gaaattggtgagagcgagtttgcaaagatgaaagtttcttatgtcagtatgagtggtcag
cagaaggccagctatggtgcaggttttacctctgccacccggtacagaaagcgcgccaga
aggaacagtgacgataataaagtcagatcccccggttcagcccagagtcaagacccggga
gagggcgtgagctcggcggctggacgcagagtgacgcgctctgaattgcgcttgagcgga
gaggagcggagagccgccggtccgaggcaggaggagctaaaacttaacagttcaacgttc
gcgttgaccggggattcatctcacaaccaggctatggtgcactggtccgggcagaacagc
agtgtgattttgatgctgaccaaactatttgacttcaacctcaacagtgtgactgagagt
tcattatggaggtcaactgactacggagcaacgtaccagaagctgaatgacaaagtagga
gcaaagacaatactcagttatttgtacgtgagccctaacaacaagcgaaagatcatgctg
ctaactgatccagaggtggaaagcagtctactgatcagcgctgatgaaggagctacctac
cagaagtacaggctgaacttttacatcctcagcctgctcttccaccctgagcaggaggac
tggattctggcctacagccacgaccaaaagctctacagctcggtggagtttgggaggagg
tggcagctggtgcatgagggagtggctcccaatcgtttctactggtcgaaaatgggtttg
gacaaagagccaggcttaattcacctggaaaccagtatctctgaaggacagtcgctgtat
gtcacctgcaagctgcagaactgcacagatgccaacaagggcaaaccattccccggatac
attgaccccaattctctggtggtgcaagatgagtatgtgtttgtccaggtatcaaccacg
gggaggccaatctactatgtgtctgctaaaagagatgtctttacacccatgaagctgccc
aagtacaccctgccgaaggacctgcacgtgatcagcacggatgaaaaccgtgtggttgca
gctgtacaggagtggaaccagaacgaaacctacaacctgtacgtgtcggacacgtcgggg
gtctactacacccttgctctggagaacgtggtcagcagcatgggccccgagggcaacgtc
atggtcgacctctatgaggtagcgggaataaaggggatgttcctagccaaccaaaaggcg
gataaccaagtgaagacgcacatcacctacaacagaggcagagactggaggttactgcag
gccccgagcaaagacctgaggggcaacagcatccattgtgtgctaccatactgttcatta
catctccatcttcatgtgtctgcaaatccctacacatctggaaacatagccagcagggac
tcagcgccggggatcattgtcgcatcaggctccatcggcgcagagctgaccaccagcaac
gtcagtgtatttattacctcggatgcaggaaacacatggagacagatcttcgacgaggag
tatgcagtgctgtatctcgaccaaggaggagccttagtcgcaataagacacactccgctt
cccatccgacacctgtggttgagctttgacgaaggacagcagtggaacaagtacagcttc
accaacacgcctctgtttgtggacggggtgctgggagagcctggggaggagactctcatc
atgacgatattcggccacgtcagtcatcgctcagaatggcagctggtgaaaatagacttc
aggtccatcttcaacaggaggtgcacagaggcggattatcagacgtggcacctacacaac
cagggcgatccgtgcctcatgggagtgaaaagaatctaccggaagcttaagcccacgtcc
aggtgcgttatgggaaagatgtactctgtgtcgatgacgtcgggcccctgtgactgtaca
gaggctgactttgaatgtgattatggctatgagagacggaccaacggcaagtgcacaccg
gccttttggttccatccatcatcgatgtccaggagttgcaccacagggatgactttcctt
aacagcactggctataggaaagtggtctctaataactgtacagctggagtaagcatggag
tacacagccaggaggcagcagtgtcccatccaagcacccaaaggtctccacctggtcacc
agcgagggcacgctgacagccattctgggcaccaatgtcaccttccttgtttttctggag
gagggcgacggggcgaggacaagcatcacgctggactttggagacggccacgctctgacc
tactccaatgtgagctctattgaggacgggatcaaacacatctacaaagctgtgggaatc
taccgggtgactgccactggggagaacagcctcggctcagagactaccatgctctacctg
catgtaacatgtcagctggagtatatccatctctcagctccctttgtggcggtgaggaat
aaggaagtgaacctgactgctgttctgtggcccagccaagtgggaacggtcacctacatc
tggtggatcggaaataacacagagcagccagtaatcaccctagagggaagtgtggcgtgc
acgttctcccgggaaggcatcagtacagtcactgtgcaggtgtctgcagggaatgctatt
ctgcaggacagaaaaaacattgctgtccacgactatttccgatctcatctgctcgccttt
tcatcaaacctggatgaccacaaccctgatgttgcagaatggaggctggatgtgagcaga
gtcatcaagaactctctgatccaggccacaggcgtgagagaggatcagcttctggtcacc
atcctaccaggtttacccacagcagcagagtttttccttctacctgacaaacagttaact
gaggggaaaccagagaagagctctgctcatttagatcagctctctgaggttttgctcagc
accttaaatcaaaaccttgtccagttcacgttgcggccaggggtccaagtcactgtgtac
gcagcacacctatcagcagcgcccctagtggacaccagcgagaaccacagtggctctgcc
atgctaatgctgctatcagtagtggttgtgggtttagctgtatttgtcatctacaaattc
aagaggaagatcccaggcctcaacgtctatgcgcagatgcagaacgaaaaagaacaagaa
atgagtccagccaatccaacagaggccacgcccagttcacagcgggacttggtgcattct
ttggagattctggacacagagtttaactcacggcccatcggatatatgaaacctcacgta
catgtgaaattctccacagaactccccacgtacatcgtctaa
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