Siniperca chuatsi (mandarin fish): 122874884
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Entry
122874884 CDS
T08948
Name
(RefSeq) titin-like
Organism
schu
Siniperca chuatsi (mandarin fish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Pur_ac_phosph_N
ig
Ig_2
fn3_2
CRLF2-like_D2
V-set
SusE
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
122874884
NCBI-ProteinID:
XP_044049315
LinkDB
All DBs
Position
LG4:16578044..16586586
Genome browser
AA seq
2137 aa
AA seq
DB search
MEASNNETGKKAEDQAHTLNINMTPDTDAELTAKDVQGQHATSAENGEHNPKVQPGPVTD
KENAVKPKLQITFNTFTVKNGEDLKVEVPVVGHPAPKIEWRRDGQAVKETSRLEVSNTSS
LTVLHIRRAAREQSGQYSITASNSAGKYTGEIIVVVLEKPDPPTGPVRIDEVSSDYVTIS
WEPPEYTGGCQLDNYIVEKRETTSTEWQTVSATTVRTTIKVTKLKTGSEYQFRLLAENRY
GKSTAITSPLVTAQYPFSVPTAPGTPFASAVTKYSMVVEWEPPAKDGGSPIIGYHLERKE
KNSILWTKLNKLVIPDARFKTGGLEEGIEYEFRVFAENIAGLSPSSKISESYVARDPCDP
PGKPEAVVITRENITLQWAKPRYDGGSTITGYVVEKKELPDGRWMKANFTSVIENQFTVT
GLTGGQSYEFRVTAKNGAGVWSTPSESVTIIAQDVIEGPTAFIDPKFKSTTVVQAGETFV
IDADYFGKPLPEVTWLKNGKGIDKVTPRMEVKNTLTHTTLTVRDCTRVDGGHFVLSLSNT
GGTTSIPVNVKVLDRPGPPDGPLKVKVVSAEKCNLHWNPPVNDGGASVSHYIIEKRETSR
VTWTGVEPHVEAVSYKVTKLVPGKEYIFRIAAVNKFGVGEFLESDPFIAQNPFTAPSAPS
TPTASAVNGDSVVLTWERPETDGGSEIDGYILEKRDKEGVRWTKCNKRRLNDLRFRCTGL
AEGHYYQFRVSAENAAGLGAPSEPSEYIKVCEATYPPGPPTNPKVTDYSSSTVSLTWSKP
IYDGGAAISGFAVEMKEAAEDEWITCTPSTGVEDTNYTVKRLRENAEYNFRICAMNAAGV
GEHVDLPGSVVAAEKLEAPEIELDTTLRKMVSVRACSTLCLFVPIRGRPEPEVKWSKEGG
TLSECAQIKVTSSYTELLIENVNRNDTGKYVLTAENCNGSKSAFINVRVLDSPSAPTNLE
VKDVKRDSVSISWDAPLIDGGAKISHYIVEKREEARKAFTSICSNCVRNSYKIDNLQEGC
FYYFRVLAVNEFGTGLPVETTDAVKVSEAPLPPGKITLSDVTCSSARLSWEKPDHDGGSK
ITCYIVEMQAKGDDTWTICSESKALQVTINGLAKGKEYCFRVTAVNEKGKSEPKSLLAPV
TVNDTSAEPIIHLLSNTFSVRAGNDLKIDVPFKGVPPPTVAWKKDGNLLKETSRVNVHTS
DTSSQIIIKDATRIDVGVYEVTLANSVGTTSTEIFVNVFERPGPPSDLSVDEVSADFMSL
SWQPPHYTGGCQISNYVVEKRDTGSTTWQTVSATVARTSIKISRLTQGTEYQFRIAAENR
YGKSHFVESEPVVAQYPFKPPGPPTTLRIVNASKSVMVVAWSKPDSDGGSPIIGYHIECK
DQSSILWTKLNRSPVTDNQFKVTSVEEGLIYEFRVCAENMAGVGPCSKASEPVAARDQCD
PPRNLTVTNITNSSVSLSWDKPEYDGGAKITGYIVERKELPDSCWLKCNFTNLQDTFLEV
TGLTEGEQYDFRVIAKNAAELFSASSETTGPVTVQHDVEPPKIILEDKFRQVVVVKAGEL
LRIDADISGRPNPTVFWLKNGRNIGTKGRVEITATKTHTSLLIRETVRKDSGQYTLTLQN
TGGTTSKAITCKVLDRPSPPAGPLEVSGLSAEKCTLSWGPPHETGGAEIMHYIVEKCETS
RVAWILVYGDMMATTCKITKLLKGNEYLFRVRAVNKYGEGETLESEPIKAMDPFSIPSAP
MDVEVTSATSDAMTICWKRPATDGGSRISGYIIEKREKQGVRWVRVNKKPVYDLRVKASC
LHEGCEYEFRVFAENAAGLSEPSLPCPLTLAEDPKFLPSPPAKPTIMDSSRSSITLSWNK
PLFDGGAAVTGYKVEFRKSSEEDWTVGVHNTDKTEFTVTGLASETEYVFIVRSINKIGIS
EPSPETDPQVAMEREEEPRFDISTEMRKALLVKDGSSFTLTVPFIGKPVPSVTWDKADVD
LRVRGMINTSSCVTSITVEGATRDDSGKYIVKLQNVAGSASLTLNVRVLDSPGPPTHVAV
KDVTKNSATVSWDIPENEGGAPVKNYFVDIRDISRKGWTRLTDKCRRLSYKVSDLEEGGI
YFFRVTAENEYGIGVPAETKEGTKMADTTDWETNPGA
NT seq
6414 nt
NT seq
+upstream
nt +downstream
nt
atggaagccagcaacaatgaaacaggaaagaaagcagaggatcaagcccacactctaaat
ataaatatgaccccagatactgatgcagagctcacagcaaaggatgtccaaggtcagcat
gccacttctgcagagaacggagaacacaaccctaaagttcaacccggccctgtcacagat
aaggaaaatgctgttaagccaaaactccagataacttttaacacgtttactgtcaagaat
ggtgaagatttgaaagtagaggtcccagtggttgggcacccagcaccaaagattgaatgg
agaagagatggtcaggcagtcaaagagacatcaaggctagaggtttcaaatacatcgtca
ttaacggttcttcatatcagacgtgctgccagggagcagtctggtcaatactctatcaca
gcaagcaacagtgctggaaaatatacaggagaaatcattgtggttgttcttgagaagccg
gacccacccacagggcctgtgaggattgatgaggtcagttctgactatgttaccatctcc
tgggagccaccagaatacacaggaggctgtcagctagacaactacatagtggagaaacgg
gaaactacaagtacagaatggcagactgtgtcagcaacgacagtaagaaccacaatcaaa
gtcaccaaactgaagacaggaagtgaataccaattcagattgttggcagaaaataggtat
ggaaagagtactgcaatcacctctcctcttgtaactgcacaatatccttttagtgtgccc
actgctcctggcaccccctttgcgtccgcagtgacaaagtacagcatggtggttgaatgg
gagcctccagccaaagatggaggcagccccatcatcggctatcaccttgaacgcaaagag
aagaacagcattttatggaccaaactgaacaaacttgttatacctgatgctcgcttcaaa
acaggtggactggaggaaggcattgagtatgaattcagagtctttgctgagaatattgct
ggactcagtccatctagcaagatatctgagtcatatgtggcaagagacccgtgtgatcca
cccggtaaacctgaagctgttgtcattactagagagaacatcacacttcagtgggcaaaa
cccaggtatgatggtggaagcaccattacaggctacgttgttgaaaagaaggagctccca
gatggcagatggatgaaggcaaacttcaccagtgttattgagaatcagttcacagtcaca
ggtctgacaggaggccaaagttatgagtttagagtaactgctaagaacggtgctggtgtt
tggagcaccccttcagaaagtgtaaccatcatcgctcaggatgttattgaaggacccaca
gcattcattgatcctaagttcaagagtactactgttgttcaggctggtgagacattcgtt
attgatgctgattacttcgggaagcccctccctgaagtaacatggctgaaaaatggaaaa
ggaattgacaaagttacaccgagaatggaggtcaaaaacaccctcactcatacaactctg
accgtcagagactgtacacgagtggatggaggacactttgtcttgagcctcagtaacact
ggtggaactacatctatcccagttaatgtgaaggtcctcgatagacctggtcctccagat
ggacctctgaaggtgaaagttgtcagtgcagagaagtgtaatcttcactggaacccccct
gtaaatgatggcggtgccagtgtttcccactacatcattgaaaaaagggagaccagccgt
gttacatggacaggggttgagcctcacgttgaggctgtcagttacaaagtgacaaaactg
gtgcctggtaaagaatatatattcaggattgctgccgtgaataaatttggtgttggtgaa
tttctggaatcagaccccttcattgcacaaaacccttttacagcacctagtgcaccttct
acccctacagccagcgctgtgaatggtgactctgtagtgctaacatgggaaaggcctgag
actgatggaggctcagagattgatggctacatcctggagaaacgtgacaaagagggtgtc
aggtggactaaatgcaacaagagaagactaaatgatttacgcttcagatgcacagggctc
gctgagggacattactatcagtttagagtatcggcagagaatgctgctggtctgggtgca
cccagtgagccaagtgagtatataaaagtatgtgaagctacgtacccacctggtccccct
accaaccccaaagtgacagactattccagcagtactgtgtctctgacatggtcaaagccc
atctatgatggtggagcagccatcagtggatttgcagttgagatgaaagaagcagcagaa
gatgagtggatcacttgcacaccaagcacaggtgtagaggacacaaactacactgtgaag
agactgagagaaaatgcagagtacaattttcgtatatgtgcgatgaacgccgctggagtt
ggagaacatgtggatctacctgggtctgtggtagctgctgaaaaactggaggcaccagag
attgagttggacactaccttgaggaaaatggtcagtgttcgagcctgttccacattatgt
ctctttgtccccatcagaggaaggccagagcctgaggttaagtggtcaaaggaaggtggc
actctcagtgagtgtgctcaaattaaggtaacaagctcctacacagagttattgattgag
aatgtcaatagaaatgacacaggaaaatatgtgttgactgctgagaactgcaatggttct
aaatcagcattcatcaatgtcagagtattggactctcccagcgcaccaacaaatttagag
gtaaaggatgtaaagagagactctgtgtccatctcctgggatgcacctctcattgacgga
ggagcaaagatttcacactacatcgtagaaaaacgagaggaggctaggaaggcattcaca
agcatctgtagcaactgcgtgagaaactcatacaagattgacaatctccaggaaggatgc
ttctattatttccgtgtcctggctgtgaatgagtttggcactggactgccagtagagacc
accgatgctgttaaagtgtctgaagctcctctgcctcctggcaaaatcacactcagtgat
gttacttgcagcagtgcaagactctcttgggagaagcctgaccatgatggaggaagcaaa
atcacatgttatatcgtagaaatgcaggctaagggagatgacacatggacaatatgttca
gagagtaaagcactgcaagtgactattaatgggctggcaaaaggaaaggaatattgcttt
agagtgactgctgtaaatgaaaagggaaaaagtgaaccaaagtcccttttggcacctgtt
acagtaaatgatactagtgctgagcccattattcatttgttgtccaacacattcagtgtg
agggcaggaaatgatttaaagattgatgttccattcaagggtgtaccaccgccaacagta
gcctggaagaaagatggcaacttgctgaaagagacaagcagggtaaatgtgcacacatct
gacacatcatctcagatcattatcaaagatgcaaccagaatagacgttggtgtgtatgag
gtgacgctggccaactcagttggaaccacatccactgaaatctttgttaatgtgtttgaa
agacctggaccaccaagtgacctcagcgtggatgaagtgagtgctgactttatgtctttg
tcatggcagcccccacattatactggcggatgtcaaatcagtaattatgtggttgagaag
agagatacaggcagcacaacatggcagactgtgtcagctacagttgccagaacatcaatc
aaaatttcccgtctgacacagggcactgaatatcagtttcgtattgctgcagagaatcgc
tacggcaaaagccactttgttgagtctgaacctgttgttgcccagtatccctttaagccc
cctggtccaccaaccactctccgaattgtgaatgcctcaaagtctgtcatggtggttgca
tggagcaagccagacagtgatggtggcagccctattattggttatcatattgaatgcaaa
gatcaaagcagtattttgtggacaaagttaaacagaagcccagtgactgacaaccagttc
aaggtaacaagtgttgaagaaggtctgatatatgagttcagggtctgtgctgagaatatg
gctggtgttggaccatgcagtaaggcatctgagcctgtagcagcaagagatcagtgtgat
cccccacgcaacctcacagtcaccaatataaccaacagctcagtttccctctcatgggac
aaaccagaatatgatggtggggctaaaataactgggtacattgttgagcgcaaagagctg
ccagatagttgctggcttaagtgtaacttcaccaacttacaggacaccttcttggaagtg
actggcctcacagagggtgaacagtatgattttcgtgtgattgcaaaaaatgcagctgag
ctcttcagtgcctcctctgaaaccacaggacctgttacagtgcagcatgacgtagagcca
cccaaaattatcttggaggacaaatttagacaggtggtggttgtcaaagcaggagagctc
ctaagaatagatgctgacatctctggtcgccccaaccctacagtgttttggttgaagaat
ggtagaaatattggcaccaagggaagggttgagataactgcaacaaagacacatacctct
ctacttatcagagaaacggttaggaaagactctggacagtatactctgaccctacagaac
acaggtggtaccacatctaaggctatcacctgcaaggtcctggacaggcccagcccacct
gctggacctctggaagtgtctggactctcagcagagaaatgcaccctgtcatggggaccc
cctcatgagactggcggtgctgagatcatgcactacattgttgaaaagtgtgaaaccagc
cgtgtagcttggatccttgtgtacggtgacatgatggcaactacttgcaaaataaccaag
ctgctcaaaggaaatgaatacctgttcagggtaagggcagtgaacaagtacggggaaggt
gagactttggaaagtgagcctatcaaggccatggatccctttagtatcccatctgctccg
atggatgttgaggtcacaagtgcaaccagcgatgctatgactatctgctggaagagacct
gccactgatggcggcagccgcatcagcggatacattatagagaagagggagaagcagggt
gttcgttgggttcgtgtcaataagaaaccagtctatgacctacgagtcaaagcctcctgc
ctgcatgagggatgtgagtatgaattcagagtttttgctgagaatgctgctggattaagt
gaacccagtctcccatgcccactcactctggcagaggatccaaagtttctaccttcccct
cctgcaaaacccaccataatggattcatccaggtcctccatcactctgtcatggaacaag
ccgctgtttgatggtggagcagcagtcactgggtacaaagttgaattcagaaaatcatca
gaagaagattggactgttggtgtccataacacagataaaactgagtttacagttactgga
ctcgcttcggagacggaatacgtgtttattgtcagatccataaacaagattggcatcagc
gagcccagtcctgaaacagatcctcaagtggccatggagagagaggaggagcccaggttt
gatattagcaccgagatgaggaaggccctgcttgttaaagatggcagctccttcactttg
actgtgcctttcataggcaaacctgttcccagtgtgacatgggacaaagcagatgtagat
ctgagagtcagaggaatgatcaacaccagcagctgcgtcacatctatcacagtggaaggg
gcaacacgtgatgactctggcaaatatatagtaaaactgcaaaacgttgctggatctgcc
tctttgacgctgaatgtgagggttttggattcacctggtccaccaactcatgtagcagtt
aaagatgtgaccaagaactctgccactgtttcatgggacatccctgagaatgagggagga
gccccagtcaagaactattttgtagatatacgggacatcagcagaaaagggtggacgaga
ctcacggacaaatgccgccgactgtcctacaaggtgtctgacctggaggagggaggaatc
tacttcttcagagtcacagctgaaaacgagtacgggatcggtgttccagcagagaccaag
gagggaacgaaaatggcagatacaacagactgggagacaaatccaggagcttag
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integrated database retrieval system