Siniperca chuatsi (mandarin fish): 122875513
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Entry
122875513 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
KO
K09378
zinc finger homeobox protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122875513
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
122875513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2
zf-H2C2_5
Sulfotransfer_2
zf-met
zf-Di19
Med27
Motif
Other DBs
NCBI-GeneID:
122875513
NCBI-ProteinID:
XP_044050677
LinkDB
All DBs
Position
LG4:13926334..13943776
Genome browser
AA seq
2798 aa
AA seq
DB search
MDSGEGGGGDGGGGEERDADLSPKALSLPLLTLAVIPEQGSSSHTSAMAPAKEPLTLPQQ
EEEGAEGSQAREDTQGGEHKEGGRHSQENGACQKQGMKEDFGEGYLSGQRKEEGEVHVHV
GEASVAGGLPAALSSRGGEEEKEEEEAISNQSQTKSKCSLLPQQSQHSSSSSTAKASGTL
DSKIAASPKPSPFLSTSPKHFICPSSSSALLSETEVKDIKGDQGWISGFPQSFKSQQSIL
AFPLAGTEPASTPAEVDGPAGVPHSSISNGDGAKAPEPNDSQLDTEVDDERDKEGEQKEA
VLQNLNQDLSPNSLTSHMTIMHSRNSCKTLKCPKCNWHYKSQHTLQVHMKEKHPETGGQC
VCGASGGKCVCGGATQGVCVYCSSGKPHPRLARGETYACGYKPYRCEVCDYATSSKGNLS
IHMQSDKHLNNVQNGGHSNGHMHTSHTTNNSSSSNGHAVDEPAYKLPLSIPTPATQPTKL
TPPAHSNSHGKRWRCDVCDYETSIARNLRIHTTSEKHTHNMLRLQRGYYLSHCRSLAPQL
KHLQNTGAELSLRLTSQQVAEQPVTLGSTLTPSPSPSPSPPPAPSLSPTGPLSQGVFQCL
VCSCFSSDSLASVEQHLNAPRSLPQSEWCSLLAGGCHCRLCGYTTPLRANFSLHCQTDRH
RTRYQLAAHLQEGGERGQEGAALIAKGNSVQLRCNLCDYVTSSLEKLRGHSLSSHHKASV
RVYRFLQQYDGEVDGGSWLFHCLLCNHSSSSKLQVLKHSQTPTHQQREGLLQLQPMGGEE
LAAIFTIRKSPDGDTGDLSEDMETSSETTTGPLDTTKDTCNLGAKQIPEETEETKVEERE
KRESLPPVKRPSSGCEEMENSISTKRPRIHQQNENQQTVQCPLCQVKLPYTHLQQHLTHV
HSVAQDCVDKLISTVAPSMEQPQPQVQMEPQTELCTDDTHKNKNTKNNKGISVENTEGDV
AAPKDVTALLTPPLEDNTTHPSNGRLAPQSPSQXPPSSPPPPHPATPSLSDRHGYRFRCS
RCSLAFPTQEKLQLHWQYHAMRAATECPLCSRQCRSQEALQRHMQNTHSQLENTQGQNTL
LPPHTAQYMDHNKSLVQQDFSLSPQVGQEAGEGEDEEIEEEAFGMEGKEEQKEEFKIKEK
DMVGEVDGDEEDLTEPEKGPHEEIISELSSSSLAKKSSNPTMDRYLDPTRPYKCTICSES
FTQKTILLVHYNSVSHLHRARRALQDSGTGVAAPESPRGPDPRPYRCRLCGVGYSQSSTL
DIHLRSVLHQTRARAAQNSAPQTPASSVAAPVSVPTTATQAATTREETSKSLPSTKRPDV
VSSSTSSLLGLSLAAETQPTVSNPTDSQQAKKRVAELLASRNQLMLIQQQQLAQAQAQAQ
AQLQQHTALLQSQMIQHLPLGPENLLKKHFPLAPDNLLSLQQQLLLPFYLSGDMKLNPEL
AVKSPELSQLVSANSIPKEHVKAEAKRESQPQIDEKQTQRQNSSSAVGQPKDHVQCEAVV
EEGCSGSSINQTEREHRNSSLEEEKEEIPVLTVKNKSQKEETDSSSFNLLGLQCPPPRVP
YAAVNGEPLRALLQSYGYELALQYIQSRHRHQQQISTYMIPDKQECSDINKMEMCSEEER
DEFSRLQDGKMEGCNKDNKGVEGNGEIESVPQEKQNKHEESANNEKGCCGTGEKCRDCGK
FFSDTLILKSHREYIHRMVFPTAALERFSREYRLQYDQMYPLTQPKSVENSTACTHAATP
APSSESEPLEPVKPQVKTLAPSPVPSVLDPITKTCTPATDLTPTTPAPSSPPFPSQLQEF
PQQEAPIPSTSATATSQTTSPAKSIPLSLPKIPMLPLPLPQLSIPPLPLPKLNLPPIPFP
MELPLLSPVMMQSVTLQPQPWLDSSVNPELAKLYQSQLNPALLGQQPQLSPALQGQPPQL
NPALLGQPSQPSPIQTGQQPQVSPTILEQQGRRTRTRITEEQLTVLRKHFDINSLPSDED
INKMSALSGLPHKVIKHWFRNTLFKERQRDKDSPYNFNNPPTIVLEESREEVAQNQPLTL
SPCTLSPGLPANTSPHPRTTDLQRGEPHRGRRSSRTRFTEQQLETLQGVFEATPYPREEE
YDRLSALLSLPNRVIVVWFQNARQRARKNQDRGTDDGLVGKNQLDNIHRQRNGCYKNDDD
NEDNSCGDEGQDDSQNENSMDLTYEYYTHPDSPALDSYSHYTESEHPTAKGELTPVTRKQ
EDRTVSSQANKSPALVQTKNGISDADIQRKEIVQAMKTGSSPQPELNLQPESTPERPQPH
SSSISQKTVPTILSTTYSSQGHRHSPPSDQAVEKPADASPSIPAASESETSHTLLPDSTS
GLSTETQPKSQLQPQTQAQFQCSLCPVSLPSFQLWQEHQTRHLLAAQSQVQFLHSGFTDR
TMPYMMLHPNHTLMASQMLSSAMSQMHSNPTHPMISHLNSIQIKNTLSDHLSNTLTSLSQ
SSLTPMKQSSKLMSETSFEGQRGGREVEEEHRRDKRQRTTITPEQLEVLYQRYSLDSNPT
RGVLESIARDVGLSRRVIQVWFQNTRARERKGQFRSMGPGSSFSLGFNHLRCPFCRALFK
VKSALDAHMRSRHWAEAERAGYNLSMSNGSNGQIGMPTSSVMDRPGPSLSSNHILNHGYV
ISNKESIVKPTVTSLSSTTDLNNPEEEDDYEEDDEYPCEEGSNMADQGSPSPEGSGGPSS
DWGETQTLQQHHHQQQRQRTQMSHFQVLQLRDFYRSHRTPKRRECEALGQELGLPHRVVQ
VWFQNARAKEKRARSLSSDSAEREQAEMSAGAGERDRA
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggtgagggaggaggaggggatggagggggaggagaggagagagatgctgac
ctcagtcccaaggctttatctcttcctctcctgaccctggcggtcattcctgagcagggg
tcatcctctcatacctcagccatggcccctgccaaagagcccctgaccctgcctcagcag
gaggaggagggtgcagaggggtcccaggctagagaagacacccagggaggtgagcataaa
gaaggaggccgacattcacaggagaatggagcgtgtcaaaagcaggggatgaaggaagac
ttcggggagggatatttgtcagggcaaaggaaggaagaaggggaggtgcatgtacatgtg
ggagaggcgtcagttgcagggggcctcccagcagcccttagcagcagaggcggagaggag
gagaaggaagaggaggaggccatctcaaaccaaagccaaaccaaatccaaatgttcttta
ttacctcaacagagccagcacagctcttcttccagcactgcaaaggccagtggcacactc
gacagcaaaatagccgcctctccaaagccctccccttttctttccacctctccaaagcac
ttcatttgtccgtcctcctcttctgccctgctgagcgagacagaggtaaaagacattaag
ggagatcagggctggatttctgggtttcctcagagctttaaatcccagcagtctattctg
gcttttccactggcaggtacagagcctgccagtacacctgctgaggttgatgggccggca
ggggttcctcactcttccatttccaatggagatggtgccaaagctccagaaccaaatgac
agccagctagacacagaggtggatgatgagagagacaaagaaggagaacagaaagaagct
gtccttcaaaacctcaaccaagacctctctcctaattcactgactagtcacatgaccata
atgcactcacgtaattcctgcaagacgctgaaatgccccaagtgtaactggcactataag
tctcagcatacactgcaagtccacatgaaagagaaacatccggagacgggaggccagtgt
gtgtgtggcgcctctgggggaaagtgtgtgtgtggcggtgcgacacaaggtgtgtgtgta
tattgcagttcggggaaaccccatcctcgcttggcccgtggtgaaacctacgcctgtggc
tacaagccctaccgctgtgaggtgtgtgactatgctacctcatcgaaaggcaacctcagc
atacacatgcagtcggataaacaccttaataatgttcaaaatgggggacactcaaatggt
catatgcacacttctcacactaccaacaatagcagctcctccaatggtcacgcagtggat
gagcctgcatacaagctcccactctctattcccacacctgctacccagcccaccaagctc
acaccacctgcacactctaactctcatggtaagcggtggcggtgtgatgtgtgcgactat
gagaccagcattgcccgcaacctgcgcatacacaccaccagtgagaaacacacacataac
atgctacggctccagagaggttattatctgtctcactgcaggagccttgccccgcagctt
aaacaccttcaaaacacaggcgctgagctctccttgcgactaaccagtcaacaagttgca
gaacagccagtcacccttgggtctacactgactccttctccctccccctctccctccccc
cctccagccccatctctgtcccccactggacccctctcccagggcgtgtttcaatgcctt
gtctgctcctgcttttcgtccgacagcttagcgtctgtggagcagcacttgaacgcccct
cgctctcttccccaatctgagtggtgctccctgctcgctggtggctgccactgcaggctg
tgtggctacaccaccccgctgagggctaacttctccttgcactgccagactgacagacac
cgcacccggtaccagcttgctgctcacctccaggagggtggagaaaggggtcaggagggg
gccgcccttattgctaagggcaactctgtccagctgaggtgcaacctgtgtgactacgtg
accagcagtttggagaagctacggggacattccctcagttcacaccacaaggccagcgtc
cgggtttacagattcctgcagcagtatgatggtgaggttgatggaggttcgtggctgttc
cattgtctcctatgcaaccactcctcctcttctaaactccaagttctgaaacacagtcaa
accccaacccatcagcagagggaagggctactacagctgcagccaatgggcggagaggag
ctggcagccatttttaccatcaggaaaagccctgatggtgacacaggagacctcagtgaa
gatatggaaacttccagtgagaccaccactggtcctttggacacaaccaaagacacatgt
aacttgggggcaaagcagattcctgaggagacagaagaaactaaggtggaggaaagagaa
aagagggagtcattgcccccagttaagcgtccatcctctggatgcgaggaaatggaaaac
tccatctcaaccaaacgccccagaatacaccagcaaaatgagaaccagcagactgtccag
tgccctttgtgccaggttaaactcccatacacacaccttcaacagcatctcacacatgtg
cacagtgtggcgcaggactgtgtagacaagctcatcagcacagtcgcaccatccatggaa
caaccgcagcctcaggtgcagatggaaccacagacagagttgtgcacagatgatactcat
aaaaataaaaacaccaagaataacaaaggcatttcagtggagaacactgagggagatgta
gccgcacccaaagatgtcacagctctactcaccccacccctagaagacaacaccactcac
ccttccaatggcagactggctcctcagtccccatctcagnatcccccttcctccccgccc
cctccccatccagcgaccccctccctttctgatcgccatggttaccggttccgttgcagc
aggtgcagcctggcgttccccactcaggagaagctccagctgcactggcagtaccatgcc
atgagggcggcgacagagtgccccctctgctctagacaatgccgcagtcaggaggccctg
caaagacacatgcagaacacacactcacagctagagaacacacaggggcagaatacactc
ttaccgcctcatactgcgcaatacatggatcataataagagtttagttcaacaagatttt
agtttatcacctcaagtaggccaagaagcaggagaaggtgaggatgaagagatagaggaa
gaagcatttggcatggagggaaaggaggaacaaaaagaagaatttaaaattaaagagaag
gacatggttggtgaagttgatggagatgaggaggatttaacagagccagaaaaagggcca
catgaagagatcatatcagaacttagttccagctctcttgccaaaaagagctccaacccc
acaatggaccgctatctggatccaacaaggccttataaatgcaccatatgctctgaatct
tttacccagaaaaccattcttctggtccattataactctgtatcacatctccaccgggcc
agacgagccctgcaggactctggcacaggtgttgctgcccccgagtctccccgtggccca
gatccaaggccctaccgctgtcgattgtgtggcgtgggctatagccagagctccacactg
gacatacatcttcgctctgtccttcatcagactagagctcgtgctgcccagaactcagct
ccacagaccccagcatctagtgtagctgctccagtgtcagtccccactactgctactcag
gctgctaccaccagagaagaaacatccaagagtttgccttccaccaagaggccagacgta
gtaagctcttcaacctcttcgctattaggtctgagcttagcagccgagacccagccaacc
gtctctaacccaactgacagccaacaggctaaaaagagagtggcagagcttctagcatca
agaaaccagctaatgctaatacaacagcagcaattagcccaggctcaggcacaggcccaa
gctcagttacaacaacacacagctctgctccagtcccaaatgatacagcaccttcccctg
gggccagagaatctccttaaaaaacacttccccctggcaccagacaacttgctctctctg
cagcagcaacttcttcttcccttttacttgtcaggagacatgaagcttaacccagagtta
gctgttaagagcccagaacttagtcagttagtatctgcaaactccatcccaaaagaacat
gttaaggcagaagctaaaagggagtcccaaccccaaatagatgagaaacaaacccagaga
caaaattcaagctcagctgttggccaaccaaaggatcatgtgcagtgtgaagccgtggtt
gaagaaggctgcagtggatcctccatcaaccagacagaaagagaacaccgcaattctagt
cttgaggaagaaaaagaagaaatacctgttcttactgttaaaaataagagtcagaaggag
gaaacagattcctcctcatttaatcttcttggattgcagtgtcctcctcccagagtgccc
tatgctgctgtgaatggggagcctcttagagccttgctgcaaagttatggctatgagtta
gcactgcaatatatacaaagtagacacagacaccagcagcagatatcaacttatatgata
ccagataaacaagagtgctctgatataaacaagatggagatgtgctcagaggaggaaaga
gatgaatttagtcgactacaggatggaaagatggaaggctgtaacaaggataacaaagga
gtagaaggcaatggagagatagaaagcgtgccacaagaaaagcagaacaaacatgaggaa
tcagcaaacaacgagaaaggatgctgtggaacgggagaaaagtgcagagactgtggcaag
tttttttcagataccttgattttaaaaagccaccgggagtacattcacaggatggtgttt
cccactgctgcactagagagattttccagagaatacaggctgcagtatgaccagatgtac
cccctcacacagcctaaatctgtggagaattcaactgcttgcactcatgctgcaacccca
gccccatcctcagaatcagaaccactggaaccagttaagcctcaagttaaaacccttgca
ccctcacctgtaccctcagttttagaccccataaccaaaacatgcactccagctacagac
ctaacaccaactacccctgcaccttcttctcctccatttccttctcaacttcaagaattt
ccacaacaagaggcacccatcccaagcacatctgctacagctacttctcaaaccacatcc
ccagctaagtccataccgctttccttacctaaaatacctatgcttcctcttcccttgccc
cagctttctatacccccactgcctttacctaaacttaacctaccccccattccttttccc
atggagctgcctctcctctctccagttatgatgcagtctgtgactctccagccccaaccc
tggttggactcaagtgtgaatcctgagttggcaaaactctaccagtctcaactcaaccca
gcactgctagggcaacagccacagcttagtccagctttgcaaggtcagcctccacagctt
aatcctgcgctgctgggtcaaccatcccaacccagccccatccaaacaggacagcaaccc
caagtcagcccaacaatacttgagcaacagggtaggagaacccgaacacgaataactgag
gagcaactgactgttctgagaaaacactttgatattaacagcctccccagtgatgaagat
atcaacaagatgtctgctctgtctggtctgcctcataaagtcatcaaacactggttccgt
aacaccctatttaaggagcgccagcgagataaggattccccttacaattttaataacccc
ccaaccatagtcctggaggagtccagagaggaagtagcacaaaaccagcctctgacactt
tccccatgtacactgtccccgggccttccagccaacacctccccacatccccggacaaca
gacctccagagaggagagccccataggggccgacgctcttcccgaacccgcttcacagag
caacagctggagaccctgcagggggtgtttgaggccactccctaccccagagaggaagaa
tatgacaggttgtctgctctgttgtctctccctaacagagttattgttgtatggttccaa
aatgctagacagagagcccgcaaaaatcaagaccgggggacagacgatggattagtgggg
aagaaccagcttgataacattcacagacagagaaatggctgctacaagaatgatgatgat
aacgaggataacagctgtggggatgaaggacaagatgactctcagaatgaaaactccatg
gatctaacttatgagtattacacccacccagactcacctgctcttgattcttactctcac
tacacagaaagtgagcatccaacagccaaaggtgaactaacacctgttactagaaaacaa
gaagatagaacagtctcttctcaggctaacaagagcccagctcttgttcaaactaaaaac
ggaatttcagatgctgacatccagcgtaaggaaattgttcaggccatgaaaacagggtcc
tctccacaacctgagcttaatctgcagccagaaagtactccagaaagacctcagcctcac
tcttcctccatttcacaaaaaacagtacccaccatcctgtccacgacttattccagccag
gggcataggcacagccctccttctgatcaagctgttgaaaagcctgctgatgcatcaccc
agcatccctgctgcttcagagtctgaaacaagccacactctgctgccagattccacctct
ggcctatccactgaaacccagccaaaaagccagctccaaccccaaacccaagctcagttc
cagtgcagtctctgtccagtgtccttgccatcattccagctgtggcaggagcatcagacc
aggcacctcctggcagctcagtcccaggtccaatttctccactctggcttcacagaccga
accatgccttacatgatgctccaccccaaccacaccctgatggccagtcaaatgctttcc
agcgctatgtcccaaatgcactctaatcccacacatcccatgatttcacacttaaacagc
atacaaattaaaaacacactatctgatcacttgagtaacaccctcaccagcctctctcaa
agttccttgacacccatgaagcagagttcaaagctcatgtcagagaccagttttgaaggc
caaaggggcgggagagaggttgaggaggagcaccgaagggataagcgtcagagaaccacc
atcaccccagaacagcttgaagtgttgtatcagcgctacagcttagactctaaccccacc
agaggagtcctggaaagcattgcacgcgatgtaggcctctcaagacgtgtgattcaggtc
tggtttcagaatacacgagccagagagagaaaaggacagttccggtcaatggggccagga
tccagttttagcttgggtttcaaccacctgcgttgcccattctgcagggctctctttaag
gttaagagtgctctggatgcccatatgaggtcacgccactgggcggaggctgaaagagca
ggctacaacttatcgatgagtaatggatccaatgggcagattgggatgcctacgtcatct
gtcatggacagaccaggcccatctctctcctcaaaccatatcctaaaccatggctatgtc
atcagcaacaaagagtcaattgtgaagccaactgtgacctctttgtcttcaaccactgat
ctgaacaacccagaggaggaagatgactatgaggaagatgatgagtacccatgtgaggag
ggttccaacatggctgaccaagggtctcctagtcctgagggatctgggggtccaagctca
gattggggtgagacacaaactttgcagcagcaccaccatcagcagcagcgccaaaggaca
cagatgagccacttccaggtactccagctcagagacttctacaggagccatcgtaccccc
aaacgacgtgagtgtgaggcactgggccaggagttgggactgcctcaccgcgtggtgcag
gtgtggttccagaatgccagagccaaggagaagagggccaggagcctgagctctgactct
gcagagagggagcaggccgagatgtctgcaggggcaggggagagagacagagcttag
DBGET
integrated database retrieval system
