Siniperca chuatsi (mandarin fish): 122878755
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Entry
122878755 CDS
T08948
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03320
PPAR signaling pathway
schu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122878755 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
122878755 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122878755 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122878755 (nr1h3)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122878755 (nr1h3)
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
122878755 (nr1h3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
122878755
NCBI-ProteinID:
XP_044057990
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Position
LG1:complement(7284392..7299830)
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AA seq
464 aa
AA seq
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MSTLSVTDIPDVGHDESKVLDRASELQLDCLVEESSGSTTMKHEGLLSLADLSHPDDFPV
LPHNGPSLTEMSSPLPIEPNDIKLDPAAGDTSASIDGQPVKRKKGPAPKMLGNEVCSVCG
DKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAG
MLEQCVLSEEQIRLKKMKKQHEEETARTSTVVTPTPPQEAAPLDPQQQEMIEKLVAMQKQ
CNKRSFLDRPKVTPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTR
EDQIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFS
KGMNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHLM
FPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgtgactgatatcccagatgttggtcatgatgagagtaaggtgttg
gacagggcctctgagctgcagctggactgcttggttgaggagagcagtggaagcaccaca
atgaagcatgaaggcctgctgtcgctggctgacctctcccacccagatgacttccccgtc
ctccctcataatggcccttcactgactgagatgagcagccctcttccgatagagccaaat
gacattaagctggatccagctgcaggtgacacatctgccagcatagatggtcagccagtg
aagagaaagaaggggcctgctccaaagatgcttggcaatgaggtgtgcagtgtatgtggt
gacaaggcctctggtttccattacaatgtgttgagctgtgagggctgcaagggcttcttt
cgtcgcagcgtcattaaaagtgcccagtactcctgcaaaaacaacggccgctgtgaaatg
gacatgtacatgcggcgcaagtgccagcagtgccgcctgcgcaagtgtcgggaggcaggc
atgctggagcagtgtgtgctctctgaggaacaaatcagactgaagaagatgaagaagcag
cacgaggaggaaacggcccgcacgtccacagtggtcacgcccacccctccacaggaagca
gccccactggatccacagcagcaggagatgattgagaagctggtcgccatgcagaagcaa
tgcaacaagaggtctttccttgaccgaccaaaagtgacaccgtggccacagagtcaggac
ttgcagaaccgagaggtgcgtcagcagcggttcgcccacttcactgagctagcaatcatg
tcagtccaggagattgtggattttgctaagcagcttcctggtttcctggagctcacaaga
gaggaccagattgctctactgaagacgtctaccattgagattatgctgctcgagacatct
cggcggtataaccctgctatcgatagcattacatttctgaaggatttcagctataataag
gaggattttgccaaagcagggcttcagtttgagttcattaaccccatctttgagttttca
aaaggaatgaacgacctgcatctggatgaggccgaatatgccctgctcatcgccataaac
atcttttctgcagatcggccaaatgtgcaggatcatgatctggtggagaggctgcagcag
ccctatgtggatgcacttcgttcttacatcatgataaagagaccaaatgatcacttgatg
tttccccgtatgctgatgaagctagtgagtcttcgtacgctaagtagtgtccactcggag
caggttttcgcccttcgcctccaggacaagaagcttcccccgctgctctctgaaatctgg
gacgtcaatgagtga
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