Siniperca chuatsi (mandarin fish): 122882209
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Entry
122882209 CDS
T08948
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122882209 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122882209 (abcb4)
04147 Exosome [BR:
schu04147
]
122882209 (abcb4)
04090 CD molecules [BR:
schu04090
]
122882209 (abcb4)
Enzymes [BR:
schu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122882209 (abcb4)
Transporters [BR:
schu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122882209 (abcb4)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122882209 (abcb4)
CD molecules [BR:
schu04090
]
Proteins
122882209 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
Rad17
RsgA_GTPase
AAA_5
AAA_28
G-alpha
DUF815
AAA_30
PRK
AAA_29
AAA_15
AAA_7
DUF87
tRNA_lig_kinase
NTPase_1
DUF2207_C
Sigma_reg_N
Motif
Other DBs
NCBI-GeneID:
122882209
NCBI-ProteinID:
XP_044065307
LinkDB
All DBs
Position
LG9:13966628..13983688
Genome browser
AA seq
1294 aa
AA seq
DB search
MDPGMDVKDEMEMLATAKHEKNGDLSESKKNDKNKRKKKKEKEPKLPKVGPIALFRFANR
LDLVLILIGTVMAIVNGVVLPLMCVVFGDMTDSFIKDAMMSHINISNPNFTYTPSNSSLE
EEMTVYSGYFSIMGAIVLVAAYMQVAFWTLAAGRQVKRIRKLFFHHIMQQEIGWFDVNET
GELNTRLTDDIYKIQEGMGDKAGRLIQAYTTFIASFIIGFYKGWKLTLVILAVSPALGIS
AAVFSRVLATFTSKEQTAYAKAGAVAEEVLSAIRTVFAFSGQDREIKRYNKNLEDAKNMG
IKKAISANVAMGFTFMMIYLSYALAFWYGSTLILSKEYTIGTLLTVFFVVLIGAFTVGQS
SPNIQTFASAQGAAYKVYSIIDHKPSIDSFSEAGFKPDSIRGDIEFKNIHFSYPSRPDIR
ILNNLSLSVMSGQTIALVGSSGCGKSTTVQLLQRFYDPQEGAVTIDGHDIRSLNIRYLRE
MIGVVSQEPILFATTIAENIRYGRLDVTQEEIEQATKEANAYDFIMNLPDKFDTLVGDRG
TQMSGGQKQRIAIARALVRNPKILLLDEATSALDAESETIVQAALDKVRLGRTTIVVAHR
LSTIRNTDVIAGFQKGEIVELGTHSQLMEKKGVYHTLVTMQTFQKVEDGEEADNESVDEK
SPLVKSFSESSLYRRKSTRGSSFAASEGEKEEKNTYHQDKTEEDEHVPPVSFLKVMRLNL
SEWPYMLLGTICAIINGAMQPLFAVIFSKIITGFAEPDQEVVRQKSAFFSLMFAAIGGLS
FVTMFLQGFCFGKSGEILTLKLRLGAFKSMMRQDLGWFDDPKNSVGALTTRLATDAAQVQ
GATGVRMATLAQNLANLGTGVIISFVYGWELTLLILVLVPVMAVAGAVEMQLLTGQAGED
KKELEKAGKIATEAIDNIRTVASLNREPKFESLYQENLKVPFNNSQKKAHVHGLTFSFSQ
AMIYFAYAGGFRFGAWLIKAGRMDAEGVFLVFSAVLYGAMALGEANAFAPNYAKAKMSAS
HLIMLINKESAIDNLSQEGESPDKFDGNVSFDSVRFNYPSRPDVPILQGLNLNVRKGETL
ALVGSSGCGKSTTIQLLERFYDPREGRVELDNINVNKLNIHWLRSQIGIVSQEPVLFDCT
LAENIAYGDNSRTVTMEEIEAAARAANIHSFIENLPKKYDTPAGDKGTQLSGGQKQRVAI
ARAILRNPKVLLLDEATSALDTESEKVVQEALDQARKGRTCIIVAHRLSTIQNADRIAVF
QGGVVVEQGTHEQLLAKKGVYHMLVTTQMGHGRE
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggacccaggcatggatgtgaaggacgagatggaaatgttggctacagccaaacacgaa
aaaaatggagatttaagtgagagcaagaagaatgacaaaaataagagaaagaagaagaaa
gaaaaagagccaaagttgcccaaggtcggccccattgctctgttcaggtttgcaaaccgc
ttggaccttgtgttgatccttattgggacggtgatggccatagtcaacggggtagtactt
cctctcatgtgtgttgtgtttggggacatgacggacagctttataaaggacgccatgatg
tcccacataaacatatccaaccccaattttacctacaccccaagcaacagctccttagaa
gaggaaatgacggtttattctggttacttctctatcatgggggctatcgtgttggtggca
gcctacatgcaggtggccttctggaccctggcagccgggcggcaggtcaaacgcatccgc
aagttgtttttccaccacatcatgcagcaggaaatcggctggttcgatgtcaatgagaca
ggcgagctcaacacacgtctcacagatgatatctataagatccaagagggtatgggtgac
aaggcggggaggctgatccaggcctacaccaccttcatcgcatccttcatcatcggcttc
tacaaaggctggaaactcactctcgtcatcctggctgtgagccctgcgctgggcatttca
gccgcagttttcagtagggtgctggcgactttcactagtaaagagcaaactgcatatgcc
aaagctggagctgtggcggaagaggtgctttctgctatcaggacagtgtttgccttcagt
ggtcaggacagagagatcaagagatataataagaacttggaggatgctaagaacatggga
ataaaaaaggcgatctctgcaaacgttgccatgggcttcaccttcatgatgatctacctg
tcctatgctctggccttctggtatggaagtacactcatcctgagtaaggagtacaccatt
ggaactttactaaccgtgttcttcgttgtgcttattggagcgttcactgtgggacagtcg
tctcccaacatccagacctttgccagcgcgcagggagctgcatataaagtctacagcatt
attgatcataaaccaagcattgacagcttttcagaggccggtttcaagcctgactccatc
aggggagacatagagttcaagaacatccacttcagctacccttcgaggccggacatcaga
atattaaataacttgtctctgagcgtgatgagtggacagaccattgccttggtgggtagc
agcggctgtggtaaaagcaccacggttcagctgctgcagaggttctacgatcctcaggaa
ggagctgtaactattgacggtcacgacatccgttctcttaacatccgctacctgagagag
atgatcggagtggtgagccaggagcccatcctctttgccaccaccattgctgagaacatc
agatacggccgacttgacgtgactcaagaggagattgaacaagccactaaggaggctaac
gcttacgacttcattatgaaccttcccgataagtttgacacgctggtcggagaccgggga
actcagatgagtggaggacagaagcagaggattgcgattgctcgagctctagtccgcaac
cccaaaatccttctgttggacgaagccacatctgctcttgatgctgagagtgagaccatt
gtgcaagctgcactcgacaaggttcgactgggtcgtaccaccatagttgtggcccaccgc
ctctcaaccattagaaacactgacgtcatcgctggcttccagaaaggtgaaattgtagag
ctggggactcacagccaactgatggaaaaaaagggagtctaccatacactggtcaccatg
cagacatttcagaaagttgaggatggggaggaggcagacaatgagtctgtggatgagaag
agcccgttagtcaagtccttctcagagtcctctctgtacaggaggaagtccacaagagga
tcctctttcgctgcctcagagggagagaaagaggaaaaaaacacgtatcaccaagacaag
acagaagaggatgaacatgttccccccgtgtcgttccttaaagtgatgcgtctaaacctt
tccgagtggccatacatgttgctggggaccatctgcgccatcatcaatggagcaatgcag
ccactgttcgctgtcatcttctccaagatcatcactgggtttgcagagccagatcaagag
gttgtcaggcaaaaatctgcattcttttccctgatgtttgctgctattggagggttatcc
tttgtcaccatgtttctacagggtttctgttttggtaaatcgggagagattctgaccctg
aaactgagactcggggcctttaagtccatgatgagacaggacctcggctggtttgacgac
cccaaaaacagtgttggagcgctcactacgagattggccacagacgctgcccaagtacag
ggggctacaggagtacgtatggccacgctggcccagaacctcgccaatctgggcaccggt
gtgatcatctcctttgtgtacggctgggagctcaccctgctcatcctggttttggtgcct
gtcatggcggtggccggagctgtggagatgcaactgctcacaggacaagctggtgaagac
aagaaagagctggagaaggccggaaagattgctacagaggccatcgacaatatccgtact
gttgcctctctcaacagagaacccaagtttgagtctttgtatcaggaaaacctcaaagtg
ccattcaataactcccagaaaaaggcccatgtgcatggtcttaccttctccttctcccag
gccatgatctacttcgcttatgcaggcggattccgctttggagcttggctcattaaggca
ggaaggatggatgctgagggggtattccttgtgttttcggctgttctgtacggtgccatg
gctctcggagaggccaacgccttcgctccaaactatgcaaaggccaaaatgtcagcttcc
cacctcataatgctgataaacaaggagtccgccattgataatctgtcacaggagggagag
tcaccggacaaatttgatggtaatgtgagctttgacagtgttagatttaactacccttca
cgccctgatgtacccatccttcaagggctgaatctgaacgtgagaaagggagagactctg
gccttggtggggagcagcggctgtggaaagagcaccaccatccagctgctggagaggttc
tacgaccccagagaagggagagtggagctggacaatataaatgtaaacaagctgaacatc
cactggttgagatcccagataggcatcgtatcccaggagcccgtgctgttcgactgcacc
ttggcggaaaacatcgcctatggagacaacagccgcactgtaaccatggaggagatagag
gccgctgctagagcggccaacattcacagcttcatagaaaacctgccaaagaagtacgac
actccggcaggtgacaagggaacacagctgtcaggtggccagaagcagcgcgtggccata
gcccgagccatcctccgcaaccccaaagtgttgctcctggacgaggccacctccgcactc
gacactgagagtgagaaggtggtgcaggaggcgttggaccaggccaggaagggcaggacg
tgtatcatcgtggcccaccgcctgtccaccatccaaaacgccgaccgcatcgctgtcttc
caggggggagtggtggtcgaacaggggacacatgaacagctgctggccaagaagggagtc
taccacatgctagtcaccacacagatgggccacggaagggaataa
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