Siniperca chuatsi (mandarin fish): 122886758
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Entry
122886758 CDS
T08948
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122886758
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122886758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
RSS_P20
MRP-S31
U-box
zf-RING_11
Gp58
Motif
Other DBs
NCBI-GeneID:
122886758
NCBI-ProteinID:
XP_044075257
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Position
LG13:complement(4002299..4005193)
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AA seq
577 aa
AA seq
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MAQKGVQLDQETISCSICLDLLKDPVTIPCGHSYCMNCIKSFWDQEDEKNIHSCPQCRQF
FVPRPVLVKNIVLAVLVEELKKTGFQAAPVDHCYAGPEDVACDDCTGRKLKALKSCLVCP
ASYCEKHVQPHYDVAQLKKHKLVDPSKKLLENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTEKQRELEVSRQNIQQRIQDREKDVKLLQQEVEAIDRSADKAVEDSE
KIFTELIRLIQKRSSDVKQQVRSKQQTEVSRAKELQEKLEQEITELKRKDTRLKQLSYTE
DHNQFLHSYPSLSRLRESTDSSSINIRPLRYFEDVTLALSEVRDKLQDVLRGKWTNILQT
VTEVDVLLSNSQAEPKTRAGFLKYSCQVTLDPNTANTRVLLSERNRKATGINERQSYSSH
PDRFTRWCQVLSRESLTGRCYWEVEWEGKGVYVAVAYKNISRAGVGNECAFGQNDKSWAL
HCDINSYNFCYNNVQTPVSGPQSSRVGVYLDHRAGILSFYSISETMTLLHRVQTTFTQPL
FAGLRILDFGVTAEFCKLQSAEVMEAIAALRGTEERH
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccaggaaactatttcttgttcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatcaagaggatgagaagaacatccacagctgccctcagtgcaggcagttc
tttgtaccgaggcctgtcctggtgaaaaacatcgtgttagcagttttagtggaggaactg
aagaagaccggattccaagctgctcctgttgatcactgctatgctggacctgaagatgtg
gcctgtgatgactgcactgggagaaaactgaaagccctcaagtcctgcctggtctgtccg
gcctcttactgtgagaaacacgtccagcctcattacgatgtggctcagttaaagaaacac
aagctggtggacccctccaagaaacttctggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaagcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
ctccagcaggaggtggaggcgatcgatcgctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatccagaaaagaagctctgatgtgaagcagcag
gtcagatccaagcagcaaactgaagtgagtcgagccaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacactaggctgaagcagctctcatacacagag
gatcacaaccagtttctacacagctacccgtcactgtcacgactcagggagtccacagac
tcatccagcatcaatatccgtcctctgaggtactttgaggatgtgacattggctctgtca
gaggtcagagataaactacaggacgttctgagagggaaatggacaaacatcttgcagaca
gtgactgaagtggatgttttactgtcaaattcacaagcagagcccaagaccagagctgga
ttcttaaaatattcatgtcaagtcacactggatccaaacacagcaaacacaagggtgtta
ttatctgagaggaacagaaaagcaacaggaataaatgaacgacagtcttattctagtcac
ccagacagattcactagatggtgtcaggtcctgagtagagagagtctgactgggcgttgt
tactgggaggtggagtgggaagggaaaggagtttatgtagcagtcgcatacaagaatatc
agcagagcaggggtcgggaatgaatgtgcatttggacaaaatgacaaatcttgggcgtta
cattgtgacataaacagttataacttttgctacaacaatgtccaaactcccgtctcaggt
cctcagtcctccagagtaggagtgtacctggatcacagggcaggtattctgtccttctac
agcatctctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctc
tttgctggacttcgaattttagattttggagtcactgctgagttctgtaaactccaatca
gcagaagtcatggaggctatcgctgctctgaggggaacagaagagcgacattaa
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