Siniperca chuatsi (mandarin fish): 122886954
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Entry
122886954 CDS
T08948
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122886954
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122886954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
zf-RING_11
Exonuc_VII_L
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122886954
NCBI-ProteinID:
XP_044075662
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Position
LG13:complement(2302295..2311885)
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AA seq
561 aa
AA seq
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MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKSFWDEEDQKKIHSCPQCRQT
FIPRPVLLKSTVLAALVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLFCL
ASYCDKHLQPHYESPAFKKHKLVDPSKKLQDNICSRHDEVMKMFCRTDQQCICYLCPVDE
HKGHDTVSAAAERTERQRELEVSRQNIQQRIQDRQKDVKLLQQEVEAINRSADKAVEDSE
KIFTELIRLMEKRSSDVKQQVRSQQEAEVSRAKELQEKLEQEITELKRKDAELEQLSRTE
DHTQLLHSYPSLSRLRESTDSSSIDIRPLSYFEDVTAAVSEVRDKLQDVLSEKWTNISLM
VTEVDVLLPQAEPKTRAGVLKYSHEITLDPNTANTYLLLSEGNRKATVMREDQSYSSHPD
RFTVWCQVLSRESLTGRCYWEVEWRGGGVSVAVAYKNISGAGSLTECVFGFNDKSWALYG
DNNSYNFWYNNVKTPVSGPRSSRVGVYLDHRAGILSFYSISETITLLHRVQTTFTQPLYA
GLRFFGSIFSSGDTAEFCKLK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggagttcagctggaccgggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaagaggatcagaagaaaatccacagctgccctcagtgcaggcagacc
tttataccgaggcctgtcctgctgaaaagcacagtgttagcagctttagtggaggaactg
aagaagaccggactccaagccgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagccctcaagtcttgcctgttctgtctg
gcctcttactgtgacaaacacctccagcctcattatgaatcacctgcctttaagaaacac
aagctggtggacccctccaagaagctccaggacaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgtactgaccagcagtgtatctgttatctctgccctgtggatgaa
cataaaggccacgacacagtctcggctgcagcagaaaggactgagaggcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagacagaaagatgtgaagctg
cttcagcaggaggtggaggcgatcaatcgctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcaggaagctgaagtgagtcgagccaaagagctgcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacgcacagag
gatcacacccagcttctacacagctacccgtcactgtcacgactcagggagtctacagac
tcatccagcatcgatatccgtcctctgagctactttgaggatgtgacagcggctgtgtca
gaggtcagagataaactacaggacgttttgagtgagaaatggacaaacatctcactgatg
gtgactgaagtggatgttttactgccacaagcagagcccaagaccagagctggagtctta
aaatattcacatgaaatcacactggatccaaacacagcaaacacatatctgttattatct
gaagggaacagaaaagcaacagtaatgagagaagatcagtcttattctagtcacccagac
agattcactgtatggtgtcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggggggggagtttctgttgcagttgcatacaagaatatcagcgga
gcagggagcttgactgaatgtgtatttggtttcaatgacaaatcttgggcgttatatggt
gacaacaacagttataacttttggtacaacaatgtcaaaactcccgtctcaggtcctcgg
tcctccagagtaggagtctacctggatcacagggcaggtattctgtccttctacagcatc
tctgaaaccatcactctcctccacagagtccagaccacattcactcagcctctctatgct
ggacttaggttttttggttcaattttctcttcaggagacactgctgagttctgtaaactc
aaatag
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