Siniperca chuatsi (mandarin fish): 122886955
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Entry
122886955 CDS
T08948
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122886955
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122886955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-RING_10
Gp58
WDCP
LMBR1
Motif
Other DBs
NCBI-GeneID:
122886955
NCBI-ProteinID:
XP_044075664
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Position
LG13:complement(2302295..2322890)
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AA seq
561 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKSFWDEEDQKKIHSCPQCRQT
FIPRPVLLKNTMLAALVEELKKTGLQAAPADPCYAGPEDVSCDVCTGRKLRALKSCLVCL
ASYCDNHLQPHYDVAPLKKHKLVDPSKKLQENICSRHDEAMKMFCRTDQQCICYLCPVEE
HKGHDTVSAAAERTERQRELEVSRQNIQQRIQDRQEDVKLLQQEVEAINRSADKAVEDSE
KIFTELIRLMEKRSSDVKQQVRSQQETEVSRVKELQEKLEQEITELKRKDAELEQLSRTE
DHNQFLHSYPLLSRLSESTDSSSIDIRPLSYFEDVTAAVSEVRDKLQDVLSEKWTNISLT
VTKVDVLLPQAEPKTRAGVLKHSREITLDPNTANTLLLLSEGNRKASLMSEQQSYSSHPD
RFTGCLQVLSRESLTECCYWEVEWRGGGVSVAVAYKNISRAGSSTECVFGFNDKSWALYC
DNNSYNFWYNNVKTPVSGPRSSRVGVYLDHSAGILSFYSISETITLLHRVQTTFTQPLYA
GLRFFGSIFSSGDTAEFCKLK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaagaggatcagaagaaaatccacagctgccctcagtgcaggcagacc
tttataccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggaactg
aagaagaccggactccaagctgctcctgctgatccctgctatgctggacctgaagatgtg
tcctgtgatgtctgcactgggagaaaactgagagccctcaagtcctgcctggtctgtctg
gcctcttactgtgacaaccacctccagcctcattacgatgtggctccattaaagaaacac
aagctggtggacccctccaagaagctccaggagaacatctgctctcgtcatgatgaggcg
atgaagatgttctgccgtactgaccagcagtgtatctgttatctctgccctgtggaggaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagacaggaagatgtgaagctg
cttcagcaggaggtggaggcgatcaatcgctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagatgctgagctggagcagctctcacgcacagag
gatcacaaccagtttctacacagctacccgttactgtcacgactcagtgagtctacagac
tcatccagcatcgatatccgtcctctgagctactttgaggatgtgacagcggctgtgtca
gaggtcagagataaactacaggacgttctgagtgagaaatggaccaacatctcactgacg
gtgactaaagtggatgttttactgccacaagcagagcccaagaccagagctggagtctta
aaacattcacgtgaaatcacactggatccaaacacagcaaacacacttctgttattatct
gaagggaacagaaaagcatcattaatgagtgaacaacagtcttattctagtcacccagac
agattcactggatgtttgcaggtcctgagtagagagagtctgactgaatgttgttactgg
gaggtggagtggagagggggaggagtttctgtagcagttgcatacaagaatatcagcaga
gcagggagttcgactgaatgtgtatttggtttcaatgacaaatcttgggcgttatattgt
gacaacaacagttataacttttggtacaacaatgtcaaaactcccgtctcaggtcctcgg
tcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcatc
tctgaaaccatcactctcctccacagagtccagaccacattcactcagcctctctatgct
ggacttaggttttttggttcaattttctcttcaggagacactgctgagttctgtaaactc
aaatag
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