Siniperca chuatsi (mandarin fish): 122886956
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Entry
122886956 CDS
T08948
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122886956
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122886956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
U-box
Prok-RING_4
Exonuc_VII_L
MRP-S31
RSS_P20
Motif
Other DBs
NCBI-GeneID:
122886956
NCBI-ProteinID:
XP_044075666
LinkDB
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Position
LG13:complement(1512884..1533444)
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AA seq
560 aa
AA seq
DB search
MAQKGVQLDRESFSCSICLDLLKDPVAIPCGHSYCMNCIKSFWDGEDEKNIHSCPQCRQT
FIPRPVLLKNTMLAALVEELKKTGLQAAPADPCYAGPEDVACDFCTGRKLKALKSCLVCL
ASYCDKHLQPHYESPAFKKHKLVDPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTEKQRELEVSRQNIQQRIQDRQKDVKLLQQEVEAINRSADKAVEDSE
KIFTELIRLMEKRSSDVKQQVRSQQETEVSRAKELQEKLEQEITELKRKDAELEQLSRTE
DHTKFLHSYPSLSRLRESTDSSSIDIRPLSCFEDVTAAVSEVRDKLQDVLSEKWTNISLT
GTEVDVLLSQPEPKTRAGVLKYSREITLDQNTAHTKMLLSEGNRKATLMRDQSYSSHPDR
FTGWWQVLSRESLTGHCYWEVEWRGGGGGGGVSVAVAYKNISRAGSSTECAFGRNDKSWA
LYCDNNSYNFWYNNVQTPVSGPRSSRVGVYLDHRAGILSFYSISETMTLLHRVQTTFTQP
LYAGLCPFYFGATAEFCKLK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaatccttctcttgttcgatctgtctggat
ctactgaaggatccggtggctattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatggagaggatgagaagaacatccacagctgccctcagtgcaggcagacc
tttataccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggaactg
aagaagaccggactccaagctgctcctgctgatccctgctatgctggacctgaagatgtg
gcttgtgatttctgcactgggagaaaactgaaagccctcaagtcctgcctggtctgtctg
gcctcttactgtgacaaacacctccagcctcattacgaatcacctgcctttaagaaacac
aagctggtggacccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgtcgcactgaccagcagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaagcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagacagaaagatgtgaagctg
cttcagcaggaggtggaggcgatcaatcgctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagccaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacgcacagag
gatcacaccaagtttctacacagctacccgtcactgtcacgactcagggagtctacagac
tcatccagcatcgatatccgtcctctgagctgctttgaggatgtgacagcggctgtgtca
gaggtcagagataaactacaggacgttctgagtgagaaatggacaaacatctcactgaca
gggactgaagtggatgttttactgtcacaaccagagcccaagaccagagctggagtctta
aaatattcacgtgaaatcacactggatcaaaacacagctcacacaaagatgttattatct
gaagggaacagaaaagcaacattaatgagagatcagtcttattctagtcacccagacaga
ttcactggatggtggcaggtcctgagtagagagagtctgactggacattgttactgggag
gtggagtggagagggggaggaggagggggaggagtttctgtagcagtcgcatacaagaat
atcagcagagccgggagctcgacagaatgtgcatttggacgaaatgacaaatcttgggcg
ttatattgtgacaacaacagttataacttttggtacaacaatgtccaaactcccgtctca
ggtcctcggtcctccagagtaggagtgtacctggatcacagggcaggtattctgtccttc
tatagcatctctgaaaccatgactctcctccacagagtccagaccacattcactcagcct
ctctatgctggactttgtcctttctattttggagccactgctgagttctgtaaactcaaa
tag
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