Sphingomonas changnyeongensis: GVO57_05050
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Entry
GVO57_05050 CDS
T07798
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GVO57_05050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schy03400
]
GVO57_05050
Enzymes [BR:
schy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GVO57_05050
DNA repair and recombination proteins [BR:
schy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GVO57_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_22
zinc-ribbons_6
SAVED
zf_Rg
zinc_ribbon_12
Motif
Other DBs
NCBI-ProteinID:
QHL90318
UniProt:
A0A7Z2NV05
LinkDB
All DBs
Position
complement(993086..995254)
Genome browser
AA seq
722 aa
AA seq
DB search
MSRARILLTNAALGPLDYRVPAGMAAPPGTIVIAPLGPRQLTGVVWEAEHMPSAGEVGDN
RLRNLIARHDAPPLRPELRRLIEWTADYYLAPPAAVLRMALPSASALDGGRTVLEYRLTG
AVPDRLSAQRERALARLAGRQGLVRELAAHAEVSDAVIRGLIKAGALGPVEVALDAPYPA
PDPDHAPPLLSPVQADAAGRLAAAVNARAFQPVLLDGVTGSGKTEVYFEAIAAALRAGRQ
ALVLLPEIALTEPFLKRFAARFGVMPVAWHSDLRQSERRRAWRAIAEGQAQVVVGARSAL
FLPYADLGVIIVDEAHETSFKQEEGVAYHARDVAVMRGRFEAIPVILASATPAIETRHQV
ELGRYQELRLPGRHGGAELPAITAIDLIAQPPPRGSWLAPPLVAALGETLARGEQALLFL
NRRGYAPLTLCRSCGHRFQCPNCTAWLVEHRLVHRLQCHHCGLVAQPPAICPECKAEDSL
VACGPGVERIADEVAALFPDAPRAIVTSDTLWSPARAAEFVRRMEAGEIAVVIGTQLVTK
GYHFPDLTLVGVVDADLGLAGGDLRAAERTFQQIAQVAGRAGRGAKPGQVFIQTHDPAAP
VIQALVSGDADSFYAAETEARRLAGAPPFGRMAAIIVSSEQANAAVETARMIGRAAPDDG
QIHVFGPAPAPLAMLRGRHRHRLLVHAPRSADLQGMIRSWLGGLNWPGSVRVAVDVDPYS
FL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgcccgcatcctcctgaccaacgccgcccttggcccgctcgattaccgggtg
ccggccggcatggccgcgccgccgggcacgatcgtcatcgccccgctggggccgcgccag
ctgaccggggtggtgtgggaggccgagcacatgccctcggccggcgaagtcggcgacaac
cggctgcgcaacctgatcgcgcggcacgatgcgccgccgctgcgccccgagctgcgccgg
ctgatcgaatggacagccgattattatctcgccccgccggctgccgtgctgcgcatggcg
ctgccctccgcctcggcgctggatggcgggcgcacggtgctcgaataccggctgaccggc
gcggtgcccgaccggctgagcgcgcagcgcgaacgcgcgctcgcccggctggccggccgg
caggggctggtgcgcgaactcgccgcccatgccgaggtgtcggacgcggtcattcgcggc
ctgatcaaggccggtgcgctcggcccggtcgaggttgcgctcgacgccccctatcccgcc
cccgatcccgatcatgcgccgccgctgctgtcaccggtgcaggcggacgcggccgggcgg
ctggccgccgccgtcaacgcccgcgccttccagccggtgctgctcgacggggtaaccgga
tcgggcaagaccgaggtgtatttcgaggcgatcgcggcggcgctgcgcgccgggcggcag
gcgctggtcctgctgcccgaaatcgcgctgaccgagccgttcctcaaacgcttcgccgcc
cggtttggggtgatgccggtcgcctggcattcggatctgcgccagtcggaacggcggcgg
gcatggcgggcgatcgccgagggccaggcacaggtcgtggtcggcgcgcgttctgccctg
ttcctgccctatgccgatctgggcgtgatcatcgtcgatgaagcgcacgagaccagcttc
aaacaggaagagggcgtggcctatcacgcccgcgacgtcgcggtgatgcgcggccggttc
gaagcgatcccggtgatcctcgcgtccgccaccccggccatcgagacgcgccatcaggtc
gaactgggccggtatcaggagctgcgcctgcccggccggcatggcggggccgaactgccg
gcgatcaccgcgatcgatctgatcgcccagccgccgccgcgcggcagctggctggcgccg
ccgctggtcgcggcgcttggggaaacgctggcgcgcggcgaacaggcgctgctgttcctc
aaccgccgcggctatgcgccgctgacgctgtgccgcagctgcggtcaccggttccagtgc
ccgaactgcaccgcctggctggtcgagcaccggctggttcaccggctgcaatgccatcat
tgcgggctggtcgcccagcctcccgcaatctgccccgaatgcaaggccgaggacagtctg
gtcgcctgcggccccggcgtcgagcgcatcgccgacgaggtcgcggcgctgtttcccgat
gcgccgcgcgccatcgtcacgtcggacacgctgtggtcgccggcgcgggcggcggagttt
gtgcggcggatggaggcgggcgagatcgcggtggtgatcggcacccagctcgtcaccaag
ggctatcatttccccgatctgacgctggtcggggtggtcgatgccgatctggggctggcc
ggcggcgatctgcgcgcggcggagcggacgttccagcagatcgcgcaggtcgcgggccgc
gccgggcgcggggccaagcccggccaggtgttcatccagacccatgacccggcagccccg
gtgatccaggcgctggtcagcggcgatgccgacagcttctatgccgccgaaaccgaggcg
cggcggctggcgggcgcgccgccctttggccggatggcggcgatcatcgtgtcgtccgaa
caggccaatgccgccgtcgagaccgcccggatgatcggccgcgccgcccccgatgacggc
cagatccatgtgttcgggccggcccccgcgccgctcgccatgctgcgcggccgccaccgc
caccggctgcttgtccatgcgccgcgcagcgccgacctgcagggcatgatccgcagctgg
ctgggcgggctgaactggccggggagcgtgcgggtcgcggtcgatgtcgatccatacagc
tttctttga
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