Streptomyces collinus: B446_12040
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Entry
B446_12040 CDS
T02787
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
sci
Streptomyces collinus
Pathway
sci00860
Porphyrin metabolism
sci01100
Metabolic pathways
sci01240
Biosynthesis of cofactors
sci03030
DNA replication
Module
sci_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
B446_12040
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B446_12040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sci03032
]
B446_12040
Enzymes [BR:
sci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
B446_12040
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
B446_12040
DNA replication proteins [BR:
sci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
B446_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
AGS69230
UniProt:
S5VLE8
LinkDB
All DBs
Position
complement(2789734..2791482)
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AA seq
582 aa
AA seq
DB search
MREFIVEADGGSRGNPGPAGYGALVADAATGETLAEAAEYIGVATNNVAEYRGLLAGLRA
AHALDPAARVHVRMDSKLVVEQMSGRWKIKHPDMKPLATQARAVFPPGQVTYEWIPRERN
KHADRLANEAMDAGAKGGQWSPTASRAALDTPPEPAGPPGDAAAGAARARAAMAKSRPTA
STRTPAAGVSGAAGAGSVAAGGEARGDAGGDAGRPAAPGGGIRPAEAGSEEHPTAARGGG
RSALAAGEERTATGGGEGRTADAGSEPAAARGGGRSALAAGEERTATGSGETCSAATDGE
GRPADAGSEPAAARSEGRPAATAGQDRPAAGDREARPALAAGENRPATARNGRHRAPGGT
THPSAPGWSAAPDMGAPATFVLLRHGETPLTPQKRFSGSGGSDPSLSDTGREQARRVAEA
LARRGTVQAVVASPLARTRETAGIVAARLGLDVAVDDGLRETDFGAWEGLTFGEVRDRYP
DDLNAWLADPAARPTGGGESFTETAVRIEATREKLVAAYAGRTVLLVTHVTPIKTFVRLA
LGAPDQALFRMELSAASLSAVAYYADGNASVRLFNDTSHLRP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggagttcatcgtcgaggccgacggcgggtcgcggggcaaccccgggcccgcgggc
tacggcgcgctggtggccgacgcggcgacgggggagacgctggcggaggcggccgagtac
atcggcgtcgccaccaacaacgtcgccgagtaccgggggctgctggccggactgcgtgcc
gcgcacgcgctcgaccccgccgcgcgggtccacgtccgcatggactccaagctggtcgtc
gagcagatgtcgggccgctggaagatcaagcaccccgacatgaagccgctggcgacccag
gcccgtgccgtcttcccgcccggccaggtcacctacgagtggatcccgcgcgaacgcaac
aagcacgccgaccggctggccaacgaggcgatggacgcgggcgccaagggcggccagtgg
tcgcccacggcctcccgcgccgccctggacaccccgcccgagccggccggcccgcccgga
gacgcggcagcgggcgcggcccgcgcccgggcggcgatggcgaaatcccggccgaccgct
tcgacgcggacgcctgcggcgggcgtgagcggggctgccggggcgggctcggtggccgcc
ggcggtgaggcgcgcggcgacgccgggggagacgcggggcgcccggccgccccgggcggc
gggatccgcccggcggaggcgggcagcgaggagcaccccacagccgcgcgcggcggggga
cgctccgcgctcgcggccggggaagagcgcacggcgaccgggggcggcgaggggcgcacg
gcggacgcgggcagcgaaccggcagccgcgcgcggcgggggacgctccgcgctcgcggcc
ggggaagagcgcaccgcgaccggcagcggcgagacgtgctccgcggccacggacggcgag
ggacgcccggcggacgcgggcagcgaaccggcagccgcgcgcagcgagggccgccccgct
gccactgccggccaggaccgcccggcagccggggaccgcgaggcgcgtcctgcgctcgcg
gccggcgagaatcgcccagcaaccgcacgcaacggaagacaccgggcccccggcgggacg
acgcacccctccgcccccggctggagcgccgcccccgacatgggggccccagccaccttc
gtgctgttgcggcacggggagacgccgctgactccgcagaagcggttctccggcagtggc
ggcagcgacccctccctctcggacaccgggcgcgagcaggcccggcgggtcgccgaggca
ctcgcccggcgcgggaccgtccaggcggtcgtcgcctccccgctcgcccggacccgggag
accgcgggcatcgtcgccgcccgcctcggcctcgacgtggcggtcgacgacgggctgcgg
gagacggacttcggcgcctgggagggcctgaccttcggcgaggtccgcgaccggtacccg
gacgacctgaacgcctggctcgccgacccggcggcccgccccaccggcggcggcgagagc
ttcaccgagaccgccgtccggatcgaggccacccgggagaagctggtcgcggcgtacgcg
ggacgcacggtcctgctggtcacccacgtcaccccgatcaagaccttcgtgcggctcgcc
ctcggcgccccggaccaggcgctgttccgcatggagctgtcggccgcctcgctgtcggcg
gtggcgtactacgcggacggcaacgcgagcgtccggctgttcaacgacacgtcccacctg
cgtccctga
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