Salicibibacter cibi: HUG20_12370
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Entry
HUG20_12370 CDS
T07369
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
scib
Salicibibacter cibi
Pathway
scib00300
Lysine biosynthesis
scib00550
Peptidoglycan biosynthesis
scib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUG20_12370
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUG20_12370
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scib01011
]
HUG20_12370
Enzymes [BR:
scib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HUG20_12370
Peptidoglycan biosynthesis and degradation proteins [BR:
scib01011
]
Precursor biosynthesis
Amino acid ligase
HUG20_12370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
CbiC
CHIPS
Motif
Other DBs
NCBI-ProteinID:
QQK80613
UniProt:
A0A7T7CFZ9
LinkDB
All DBs
Position
complement(2480329..2481801)
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AA seq
490 aa
AA seq
DB search
MYLQECLAGLLAYTKTKTENPIITSVEMDSRLAQAGTLFVAIRGFTVDGHRYAREAVKKG
AVAIVAEEDVNVDVPTIIVSDSKRALAQIANRFYHSPTHDLNIIGVTGTNGKTTTTHLLN
QILQEDNRNTGLIGTLYTQYNDEVFEAKNTTPESLVLQQTFSEMKETGVTDVTMEVSSHA
LSLGRVRGTTFNIAVFTNLSVEHLDYHETMDDYKQAKGLLFSQLGNAYDQDLKVAIVNND
DPYARYMMDVTAAPVLTYGLRDGVDVRARDLHARPTGTFFTLVIGEASIELNLKMIGRFS
VYNALAAAAAAYASGVSLSVIKQSLESAKPVPGRFEPVEEGQNFAVIVDYAHTPDSLDNI
LQTVRELTEQDVYVIVGCGGDRDRTKRPEMARIAAAYADEAIFTTDNPRSEDPRTILRDM
EAGVEGQSFRTIVDRKEAIRYAVRKAKSKDVIVIAGKGHEPYQEVDGTYHTFDDRIEAKI
AIHDRQKGEK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcaggaatgcttggcgggcttgctcgcatataccaaaacgaaaactgaaaat
ccaatcatcacttccgtggaaatggattctcgccttgcacaagcaggcacattatttgtt
gccattcgcggctttacggtcgatggccaccggtatgcgcgagaagctgttaaaaagggg
gcagtcgcgattgttgccgaggaagatgtgaacgtcgatgttccaaccatcattgtatct
gacagcaaacgggcccttgcgcaaatcgccaaccgtttttaccatagcccaacccacgat
ctaaacatcataggtgtcaccggaacgaacgggaagacgacaactacgcatctattgaat
caaatattacaagaggacaatcgaaatacaggcttgattggtaccctttatacgcaatat
aatgacgaagtcttcgaagccaaaaatacgaccccggaatcattagtgttgcaacaaacc
ttttcggaaatgaaggaaacgggcgtaaccgatgtgacgatggaagtctcttcgcacgcc
ctatccctcggcagagttcgcggaacgacgtttaatatcgctgtgtttaccaatttaagt
gtcgaacacctggattatcatgaaacgatggacgattataaacaggccaagggactcttg
ttttcacaacttggcaacgcttatgatcaggatttgaaggtggcaattgtcaataacgac
gatccttacgcccgctacatgatggatgtaaccgcagcgccggtcctcacgtacggcctg
cgggacggagtggatgttcgtgcccgtgatttgcacgcgcggccgacgggaacatttttt
acgcttgtaataggcgaagcatcgattgaattaaacttgaaaatgatcggtcgtttcagc
gtatataatgcgttggctgcagcggcggcagcatatgcgtccggggtttccttgtcggtc
attaaacagagcctggaatctgcgaaaccggtccccgggcgctttgagccggttgaagaa
gggcagaatttcgcggtgattgtcgattatgcccatacgcccgacagcttggataacata
ttgcaaacggtccgggagctgacagaacaagatgtctacgtgattgtcggatgcggtggg
gatcgggaccgtacgaaacgacccgagatggcaagaatcgctgctgcatacgcggatgaa
gcgattttcacgacggataatccacgcagtgaagacccgcgaaccattcttcgggatatg
gaagcaggggtggaaggccaatccttccggacgatcgtggaccgaaaagaagccattcgt
tacgctgttcgtaaagcaaaaagcaaagatgtcatcgtgattgccggcaaagggcatgag
ccctatcaagaggtcgacggaacctaccatacgttcgacgatcgcattgaagcaaagata
gcgatacacgaccggcagaaaggtgaaaaatag
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