Streptomyces cinnabarinus: STRCI_005319
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Entry
STRCI_005319 CDS
T08957
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00300
Lysine biosynthesis
scir01100
Metabolic pathways
scir01120
Microbial metabolism in diverse environments
scir01230
Biosynthesis of amino acids
Module
scir_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STRCI_005319 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scir01002
]
STRCI_005319 (dapE)
Enzymes [BR:
scir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
STRCI_005319 (dapE)
Peptidases and inhibitors [BR:
scir01002
]
Metallo peptidases
Family M20
STRCI_005319 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WAZ23945
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Position
5845484..5846563
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AA seq
359 aa
AA seq
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MPDTPLDLTLDAALLTARLVDFPSESGAEKPLADAIETALRALPHLTVDRYGNNIVARTD
LGRAERVILAGHIDTVPIAENVPSRLDEDGVLWGCGTCDMKSGVAVQLRIAATVPAPNRD
LTFVFYDNEEVAAHLNGLRHVAEAHPEWLAGDFAVLLEPSDGQVEGGCQGTLRVLLRTKG
ERAHSARGWMGSNAIHAAAPILARLASYEPRRPVIDGLEYREGLNAVGISGGVAGNVIPD
ECVVTVNFRYAPDRTEEEALAHVHEVFADCGVEEFVVDDHSPGALPGLSHPAAAAFIEAV
GGTPMPKYGWTDVSRFSALGVPAVNYGPGNPHLAHKRDERVETAKILAGEERLRAWLTA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacacgccgcttgacctcacgctggacgccgcgctgctgaccgcgcggctcgtc
gacttcccctccgagagcggtgccgagaagcccctcgcggacgcgatcgagaccgccctg
cgggccctgccgcacctcaccgtcgaccggtacggcaacaacatcgtggcgcgcaccgac
ctcggccgcgccgagcgcgtgatcctcgccggccacatcgacaccgtccccatcgcggag
aacgtcccctcccggctggacgaggacggcgtcctgtggggctgcggcacctgcgacatg
aagtccggcgtcgcggtacagctgcgcatcgccgcgaccgtccccgcccccaaccgcgac
ctgaccttcgtcttctacgacaacgaagaggtcgccgcacacctcaacggtctgcgtcat
gtggccgaggcacaccccgagtggctggccggggacttcgcggtgctgctggagccctcc
gacggccaggtcgagggcggctgccagggcaccctgcgggtcctgctgaggaccaagggc
gagcgggcgcactcggcgcgcggctggatgggctccaacgcgatccacgcggccgccccg
atcctggcccgcctcgcctcgtacgaaccccgccggccggtgatcgacggcctggagtac
cgggagggcctgaacgcggtgggcatctcgggcggtgtggcgggcaacgtcatccccgac
gagtgcgtcgtgacggtcaacttccgctacgcccccgaccgtacggaggaggaggcgctg
gcccatgtccacgaggtgttcgcggactgcggggtcgaggagttcgtggtcgacgaccac
agccccggggcgctgcccggcctctcccacccggcggccgcggccttcatcgaggcggtg
ggcgggaccccgatgccgaagtacggctggacggacgtgtcccgcttctccgccctcggc
gtccccgcggtcaactacggccccggcaacccgcacctggcgcacaagcgggacgagcgg
gtggagacggcgaagatcctggcgggcgaggagcgtctgcgggcctggctgacggcgtag
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