Streptomyces cinnabarinus: STRCI_006089
Help
Entry
STRCI_006089 CDS
T08957
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00521
Streptomycin biosynthesis
scir00523
Polyketide sugar unit biosynthesis
scir00541
O-Antigen nucleotide sugar biosynthesis
scir01100
Metabolic pathways
scir01110
Biosynthesis of secondary metabolites
scir01250
Biosynthesis of nucleotide sugars
Module
scir_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
STRCI_006089 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STRCI_006089 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STRCI_006089 (rfbC)
Enzymes [BR:
scir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
STRCI_006089 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WAZ27229
LinkDB
All DBs
Position
complement(6695233..6695853)
Genome browser
AA seq
206 aa
AA seq
DB search
MKALSIEGLWEVTPQQHQDARGRFMEWYRFDHLAEAVGHPLDLRQANLAVSSLGVVRGIH
FADVPPGQAKFVTCPAGAVLDVIVDMREGSPTFGRWEAVRLDGDTRKAVYISEGLGHGYC
ALTDEATVAYLCSAVYAPERERAVHPMDPDLNIDWPALGEPLLSERDSGAPTLKQLGEEG
QLPDYNACRRFTAGLDAAAAAKGASG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atcaaggcgctgtcgatcgagggtctgtgggaggtgactccccagcagcaccaggacgcc
cggggccggttcatggagtggtaccgcttcgaccacctcgccgaggcggtggggcatccg
ctggacctgcggcaggcgaacctcgcggtctcctcgctcggtgtggtgcgcggcatccac
ttcgccgatgtcccgcccggccaggccaagttcgtgacctgtccggccggtgcggtgctc
gatgtgatcgtcgacatgcgggagggctcaccgaccttcgggcggtgggaggcggtacgc
ctcgacggtgacacccgcaaggcggtgtacatctcggagggtctgggccacggctactgc
gcgctgaccgacgaggcgaccgtcgcctatctctgctccgcggtctacgcccccgagcgg
gaacgcgccgtccacccgatggaccccgatctgaacatcgactggcccgcgctcggcgag
ccgctcctttccgagcgcgactcgggtgcgcccaccctcaaacagctcggcgaggagggg
cagttgccggactacaacgcctgtcggcgcttcaccgccggcctggacgccgcggccgcc
gcgaagggagcctccggatga
DBGET
integrated database retrieval system
