Streptomyces cinnabarinus: STRCI_006533
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Entry
STRCI_006533 CDS
T08957
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STRCI_006533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scir03400
]
STRCI_006533
Enzymes [BR:
scir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
STRCI_006533
DNA repair and recombination proteins [BR:
scir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
STRCI_006533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WAZ25066
LinkDB
All DBs
Position
7219612..7220391
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AA seq
259 aa
AA seq
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MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEDAFPAEQLRELGYESAVHATG
RWNGVAVLSRVGLEDVVKGLPGDPGYDGSVEPRAISATCGPVRVWSVYVPNGREVDHPHY
AYKLQWFEALKAAVAGDAAGSRPFAVMGDYNVAPTDDDVHDVAAFEGLTHVTPAERAALA
SLRESGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNDPFTKAVKDSYVDRE
ERKGKGASDHAPVVVDLEV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacctggaacgtgaactcgatcaccgcccgcctgccgaggctcctggcc
tggctggagagcagcggcaccgacgtgctgtgcctccaggaggccaaggtcgccgaggac
gccttcccggccgagcagctgcgcgagctgggctacgagtcggcggtgcacgcgaccggc
cggtggaacggcgtggcggtgctctcccgcgtcggcctggaggacgtcgtcaagggtctg
cccggagaccccggctacgacggctcggtggagccccgcgccatctccgcgacctgcggc
ccggtccgggtctggtcggtgtacgtgccgaacggccgtgaggtcgaccacccgcactac
gcctacaagctccagtggttcgaggccctgaaggcggcggtcgcgggcgacgcggccggc
agccggccgttcgcggtcatgggcgactacaacgtggcgccgaccgatgatgacgtccac
gacgtcgccgccttcgagggcctcacccatgtcacccccgccgagcgagccgccctcgcc
tctctccgcgagtcgggcctgtccgacgtggtcccgcgccccctgaagtacgaccacccc
ttcacctactgggactaccgccagctctgcttccccaagaaccgcggcatgcgcatcgat
ctggtctacggcaatgaccccttcaccaaggccgtcaaggactcctacgtcgaccgcgag
gagcgcaagggcaagggcgcgtcggaccatgcgccggtggtggtggatctggaggtgtga
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