Sorangium cellulosum So ce56: sce3116
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Entry
sce3116 CDS
T00634
Name
(GenBank) conserved carbohydrate-binding protein, Rhs family
Organism
scl
Sorangium cellulosum So ce56
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
CAN93275
UniProt:
A9GIJ6
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All DBs
Position
4272433..4276722
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AA seq
1429 aa
AA seq
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MRTAPVPNIPAIPGMNPGVFVLGGGGDGGGAGGRGGGAGKDKQGANGKNGGDDASGGGKG
ACGSGQNGGACPNHHGKKGSGKGSKGDPVDIVTGRVFTIPVTDVHLPGPLPLTLTRSYTS
AARDRDVGLGRGWYHSYAWEVEVHRGRTRLWTGNGMYVDFTPMRVGESAVGPSGWLLVRG
KTGFVLDRGDGRWLVFEHAWQDRFLLSAETDSHDNRISFFYKEGVLAQIVDSVGRRVEVR
STREGRIASFEVKNAAHRGQLVPFARYRYDDAGDLVLAEDAMGAATRYTYTDHLLTCQEH
PTGLCFYFVYDGEGRCVETWGAYPGREDESLAADVPAVLADGITAAKGIFHTKLEYGPHN
YVEAADSISVERFFGNDFGSVDKAVTAAGVFCRTYDAWGNLLSFTDATGATTRWERDARG
RELRITDALGRVTTFERDADGHIRRAVDPAGGVIETGRLTGGLVWRDAIGATFEVHFDRR
GLTTRTVAPNGGQTLYRYDDHGNLIERTDPTGAVTQYTYDYWGRRQSMLDASGAMVTYAH
DDAGRLRSERTPDGGVTRYEYDPSGNCTSIWHPNGHTTTHRYAGYNRIVETREPDGRISK
YRYNREGRLVEVHNSHGEVHRIRLNAARLVSEEITFDGRTLRYRYDAMGRVVQFENGLGE
KTGYVYDLVGRVVEHQYPDGGVETFEYDELDYIIAAHGPSGDIFFERNLLGWVTCERQVS
GGETFSVETKHDLMGNVVERKTSRGHHQTWVLDVAGRALRVTLDGDEQLGVVRDALGRET
ARYLPGGGRVDVVYDGLDRMVQRTVSRGVAGPVVAAGQPDWIGALPHDLTLRQSVHYTPQ
GDVAAIDDDRSGAERWEHDPRGQVLARTGVHGQGEHFRYDAEGNVRELGPGAPEREYGRG
NVLLRRGPVSYVWDGDGRLIKRRVVMPSGQEATTSYEWNGAGLLSAVVRPDGVRIEHVYD
PFARRLEKRVVRRGEGGRMDTLSTTRFIWDGDTLVHEIKREWGPEGDRVTQERTYCTDEE
TSAPWAQKDARSGEGDAVSAEWYYYLNDPVGRPERLLDAAGNVACELDRTVWGAARPREG
ARTETPLRFLGQYYDDETGLAYNRYRYYDPAVGRYISVDPVGLLGGQNGFSYAGNRPTKM
VDPTGLMFSTTTGRKDANGNPLPDIQGKSSTVQSDDDLDPALRDAVSNSREKFKDPSKPD
SDPRNLDADGKVKPNASSKAGRCAEIDGLNQQAKDIRQRLSKDANGKDCDKWAKISEAER
NARVRNELREEYRRGAKIEAHSKKGKPKDSSEKPCPFCAQVFRELGIHPDNINADPNADV
PKGAKEKAGLTTGDAKGGVMSNGKKWDHKRDGVYDPDRNDPGKNVALENPSATNVVPKLN
PDGSQQKNSRDPNAFMDGQGNYKRPDKQPPPPDPKFVPPEDDNTDPTRK
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacggcacctgtccccaacatcccggccatcccggggatgaaccccggagtcttc
gttctcggcggcggcggtgacggcggcggggccggcggccgcggcggcggcgcgggcaag
gacaagcaaggcgcgaacggcaagaacgggggcgatgacgcgtccgggggcggcaaaggc
gcctgcggctccggccagaacggcggtgcgtgccccaaccatcatggcaagaaggggagc
ggcaaaggctccaagggagaccctgtcgacatcgtgacagggcgtgtcttcacgatcccc
gtcaccgacgtgcacttgccgggcccgctgccgctgacgctgacccgcagctacacgagc
gccgcgcgcgaccgcgacgtcgggctcgggcgcggctggtaccactcgtacgcgtgggag
gtggaggtgcaccgcggccggacgaggctctggaccgggaacggcatgtacgtcgacttc
acgcccatgcgcgtcggcgagtcggcggtgggcccttccgggtggctgctcgtccgcggc
aagacgggcttcgtgctcgatcggggcgacggccggtggctcgtcttcgagcacgcctgg
caagaccggttcctcctgtcggcggagaccgactctcacgacaaccggatctcgttcttc
tacaaggaaggtgtcctggcgcagatcgtcgactcggtcggtcgcagggtcgaggtccgc
tccacgagggaagggcgcattgcctcgttcgaggtgaagaacgcggcgcaccggggccag
ctcgtcccgttcgcgcggtatcgctacgacgacgcgggggacctggtgctcgccgaggac
gcgatgggcgcggcgacccggtatacgtacacggatcatctcctgacgtgccaggagcac
ccgacgggcctttgcttctacttcgtctatgacggggaagggcggtgcgtcgagacctgg
ggcgcgtacccggggcgcgaggacgagagcctcgccgccgacgttccggcggtgctcgcc
gacgggatcacggccgccaagggcatctttcacacgaagctcgagtacgggcctcacaac
tatgtggaggcggccgactcgatctcggtcgagcgcttcttcggaaacgacttcgggagc
gtcgacaaggcggtcacggccgccggcgtcttctgccgcacgtacgacgcgtggggaaac
ctgctgtcgttcaccgacgcgacgggggcgacgacccgctgggagcgggacgcccgcggg
cgggagctccggatcacggacgctctcggccgcgtgaccacgttcgagcgggacgccgac
gggcacatccggagggcggtcgatcccgcagggggcgtcatcgagaccgggcgcctcacg
ggcgggctcgtgtggcgcgacgccatcggcgccaccttcgaggtgcacttcgatcgccgc
gggctcaccacgcggaccgtcgcgccgaacggcgggcagacgctctacaggtacgacgat
cacggaaacctcatcgagcggaccgaccccacgggcgcggtgacgcagtacacgtacgac
tactggggccggcgccagagcatgctcgacgcgtcgggggcgatggtcacgtacgctcac
gacgacgccggccgcctccgatccgagcgaacgccggacggcggcgtgacgcgctacgag
tacgacccgtccggaaactgcacgtcgatctggcacccgaacggccacacgaccacgcac
cgctatgcggggtacaaccgcatcgtcgagacgcgagagcccgacgggcggatcagcaaa
tatcgatacaaccgcgaggggcgcctcgtcgaggtgcacaacagccacggagaggtgcac
cgcatccgcctgaacgccgccaggctcgtctcggaggagatcaccttcgacggccgcacg
cttcgttatcgttacgatgccatggggcgtgtcgtgcagttcgagaacggactcggcgag
aagaccgggtacgtgtacgatctcgtcggtcgcgtcgtggagcaccagtaccccgacggc
ggcgtcgagacgttcgagtacgacgagctggattacatcatcgcggcgcacggcccctcg
ggcgacatcttcttcgagcgcaatctcctgggctgggtgacgtgtgagcggcaggtgagc
ggcggcgagacgttctcggtggagacgaaacatgacctgatgggcaatgtcgtcgagcga
aagacctcccgcggacaccaccagacctgggtgctcgacgtcgccggccgcgcgctccgg
gtgacgctcgacggcgacgagcagctcggcgtcgtccgcgacgcgctcgggcgagagacc
gcccgctatttgcccggcggcgggcgtgtggatgtggtctatgacgggctcgaccgcatg
gtccagcgcaccgtgtctcgtggggtcgcaggccctgtggtggccgcaggtcagcccgac
tggatcggggcgctcccccatgacctcaccctccggcaatcggttcactacacgccgcag
ggcgatgtggccgcgatcgacgacgatcgctcgggcgccgagcgatgggagcacgatccg
cgcgggcaggtgctggcgcgcaccggcgtccacgggcagggcgagcacttccggtacgac
gcggaggggaacgtgcgcgagctcggccccggcgcgccggagcgcgagtacgggcgcggc
aacgtgcttctccggcgcggacctgtgtcgtacgtgtgggacggcgacgggaggctgatc
aagcgccgcgtggtcatgccgagcggtcaggaagccacgacgagctacgaatggaacggc
gcgggtctcctgagcgcggtggtgcgccccgatggcgtccggatcgagcatgtctacgat
ccctttgcccgacgcctcgagaagcgcgtggtcaggcgaggcgaaggcgggcgcatggac
acgctgtccacgacgcggttcatctgggacggggacacgctcgttcatgagatcaaacgc
gagtggggcccggagggcgatcgggtcacccaggagaggacgtactgcaccgacgaggag
acgtcggcgccgtgggcgcagaaggacgccaggagcggcgaaggcgacgccgtgtcggcc
gagtggtactattacctgaacgaccctgtcggcaggccggaacgcctgctcgacgccgcc
gggaatgtcgcctgcgagctcgaccgcaccgtgtggggcgccgcgcgcccgcgggaaggc
gcgcgcacggagacgccgctgcggttcctcgggcagtactacgatgacgagacgggcctc
gcgtacaaccgctatcgctactacgaccccgccgtaggacggtacatcagcgtcgacccg
gtcgggctgctcggcgggcagaacgggttctcctacgcgggcaatcggcccacgaagatg
gtcgaccccacggggttgatgttctcgaccaccacggggcggaaggacgcgaacggaaat
ccgctgccggacatccaggggaagagctcgaccgtccagagcgacgacgacctcgacccg
gcgctgagggacgcggtatcgaactcgcgcgagaaattcaaggaccccagtaagcccgac
agcgatcctcgaaacctggacgccgacggcaaggtcaagccgaacgcgtccagcaaggca
ggcagatgcgcggagatcgacgggttgaaccagcaggccaaggacatccggcagcgcctg
agcaaggatgcgaacggcaaggattgcgacaagtgggcgaagatatccgaggccgagcgg
aacgcccgggtccggaacgagctgcgcgaggagtaccgtcgcggcgcgaagatcgaggcg
cactcgaagaaggggaaacccaaggattcctcggagaagccttgcccgttctgcgcgcag
gtcttccgcgagctgggcatccatccggacaatatcaatgctgatccgaacgctgacgtg
cccaagggggcgaaggagaaagccgggctcaccaccggggacgccaaagggggcgtcatg
tccaacggcaagaagtgggatcacaagagagacggcgtctacgacccggacaggaacgat
ccggggaagaacgtcgcgctggagaatccctccgcgaccaacgtcgtccccaagctgaat
ccggacggctcgcagcagaagaactcgcgcgacccgaacgcattcatggacgggcaaggc
aattacaagcgaccggacaagcagccgccgccgccggatccgaagttcgtgccgcccgag
gacgacaacaccgacccgacccggaagtag
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