Sphingobium cloacae: SCLO_1019410
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Entry
SCLO_1019410 CDS
T05301
Name
(GenBank) autotransporter
Organism
sclo
Sphingobium cloacae
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
BAV64981
UniProt:
A0A1E1F3H1
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All DBs
Position
SCLO_1:complement(2202326..2205961)
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AA seq
1211 aa
AA seq
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MAVPVGAQTIEAQAGAGPSLRFWDGSDPALHENGVVDGGSGRWNAHDPSWTDAQGAVNGP
MRPVPAFVLFQGAAGTVTIDDSLTAPSITGMQFLTDGYRLTGGRLRLDGGAYTSIRPGPG
VTTRIDAELTGDSGLLFNDFGTLILTGDNSYTGGTRVDAGTLIGDTRSIRGELENAGTVI
FDQKEDGTFTGGIGGLFSSWGLMVKRGQGALTIGGSSLDWRIEEGRLVSPAARLGGNMAI
GAAGKLTLTGGPSDTEAAYHYALSGSGALDLAGEGMVVLTGQSGGFTGQTRVAGAALRVD
GALGGSLSVGSHGVLSGAGRVGAARVDSGGRLVGSAGGTLGFSSLTLGPGAVIDAVFAGT
DAPPLFAVEGDLTLDGTLNIGGNLPLGQGVYRLFSYGGQLTDNGLQIGALPPGQGSGTLS
VQTATPGQVNIVAATGDRALRFWDGGDATRYGNGVVDGGPGVWANGTLGWTGSDGAHNDP
AGPGDFAIFAGRGGHVLIDDANGAVSTGGMQFATSGYRLSGDPLTLSGGRRTVIRVGDGS
AASSGVTVEIASRITGGGVLVKRDAGTLILSGDNDRTFGIDVEAGSLVGDARSIRGDLSN
AGTVIFDQRGNGTFRSDIASLDGVAGSLVKRGAGDLTLTGRSSLDWTVEEGRLLTNAGRF
IGDATLHPKGSIEFASASNTRYLGRLAGSGRFVKAGAGNLALGTDSRGFTGDTLVRAGSL
TVEGAIRGRLTVAADAALAGYGSMGSVRVDPGGRIAPGPSIRTLTVQGDLLIASGARYEV
EVDPTGAASDRIDVLGKATLAGTVAHVGPNGAYRPRATYTILTARGGIEGRFDDVRSTFA
FLTPSLGYTPHAVTLTLERNDVRFDQVAATDNQRATAAALESLSSDNGAYDAVVTADAAT
ARQAFDSLSGEFHASLRTALIENSRLSREATLDQLRTRRTAPGLAMWGQVLDSSRHWTGH
SGVSTLAGDMMGTLAGVEAQTPGGFRIGMLGGHHRDALHGRGNADIDGYHAGVYAGGASG
PLGFGGGLIFGWQDVAAQRLVTFNGFQEGVQSRYRATTMQAFAEAAYRVDFDEGALEPFV
GLTHVALSVGSSREAGNVAALDLARDRLRTSYTTMGVRGRTAIPLGGASLSLRASAAWQH
AFGDRTGMIEAALGGRRFTITGARIAQDSLVGELSLDAALTPALRLNLGYSGALPRGARD
SVARAALTWSF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccgtccccgtgggcgcccagacgatcgaggcgcaggctggcgcggggccatcgctc
cgcttctgggatgggagcgatcccgccctgcacgagaatggcgtcgtcgacggcggatcg
gggcgctggaatgcccatgatcccagctggaccgatgcccagggcgccgtcaatggccct
atgcggccggtgccggccttcgtcctgttccagggcgccgcgggaaccgtgacgatcgac
gattccctgacggcgccgtccatcaccggcatgcagttcctgacggatggctatcgcctg
acgggcggccggctgcggctcgacggcggagcctatacgtcgatccgtcccggtccgggc
gtgacgacccggatagacgcggaactgaccggcgacagcgggttgctgttcaacgatttc
ggcacgctgatcctgaccggcgacaacagctatacgggcggcacgcgcgtcgatgccggg
acgttgatcggcgacacccgatcgatccgcggcgagctggaaaatgccggcaccgtgatt
ttcgaccagaaggaggacggcaccttcaccggcggcatcggcggcttgttcagcagctgg
ggcctgatggtcaagcgcggccagggcgcgctcacgatcggcggcagcagcctcgactgg
cggatcgaggaagggcggctcgtctcgccggccgcgaggctgggcggcaacatggccatc
ggagccgccggaaagctgacgctcaccggcggcccgtccgacacggaggcggcctatcac
tatgccctgtcgggaagcggcgccctcgatctggcgggagaaggcatggtcgtcctcacc
ggccagtccggcggcttcacgggacagacgcgggtggcgggcgcggcgctccgcgtcgac
ggcgcgttgggcggcagtctttcggtcggctcccatggggtgctttccggtgcgggccgg
gtgggcgcggccagggtcgattccggcggacgcctcgtcggctcggctggcggcacgctc
ggcttctccagcctgacgctgggtccgggcgcggtcatcgacgccgttttcgccgggacg
gacgcgccgccgctattcgccgtggaaggcgatctgacgttggacggcacgctcaatatc
ggcggcaacctgccgctcggccagggcgtctaccgcttgttcagctatggcgggcaattg
acggacaatgggctgcaaatcggtgcgctgccgcccggtcaggggagcggcacgctttcg
gttcagaccgcgacgccggggcaagtgaatatcgtggccgcgaccggcgaccgtgcgctc
cgtttctgggacggcggcgacgccacccgctacggcaatggcgtggtcgatggcggcccc
ggcgtctgggccaacggcacgttgggctggaccggctcggacggcgcgcataacgatccg
gccgggccgggcgacttcgccatcttcgccggccggggcgggcatgtgctgatcgatgac
gcgaacggcgcggtctcgaccggcgggatgcagttcgccacgtccggctaccggctgtcg
ggcgatccattgacgctgtcgggcggccggcgcaccgtgatccgcgtcggcgacggcagt
gccgcttcgtcgggcgtcacggtggagatcgcctcccggatcaccggcggcggcgttctg
gtgaagcgcgatgccggcacgctgatcctgtcgggcgacaatgaccggacattcggtatc
gatgtcgaggcgggctccctcgtcggcgacgcgcgctccatccgcggcgacctgtccaac
gccgggaccgtgattttcgaccagcgcggaaacggcaccttcaggagcgacatcgcctcg
ctggacggcgtggcgggctccctcgtgaagcgcggggccggcgatctcacgctgacgggc
aggagcagcctcgactggacggtcgaggagggacgccttctcaccaatgcgggccggttc
atcggcgatgcgacgctccatccgaagggatcgatcgaatttgcgagcgcctccaacacg
cgttatctcggcaggcttgcgggatcggggcggttcgtcaaggcaggggcgggcaatctg
gcgctgggcacggattcccggggcttcacgggcgacacgctggttcgcgccggatcgctg
acggtggaaggcgccatccggggcaggctgacggtcgcggccgatgcggcgctggccgga
tatggcagcatgggttccgtccgcgtcgatccgggcggccgcatcgcgccgggaccgtcg
atccgcacgctcacggtgcagggtgacctcctgatcgcgtccggcgcgcgctacgaggtc
gaagtcgatccgaccggcgccgccagcgatcgcatcgatgtgctggggaaagccacgctg
gccggcacggtcgcccatgtcggcccgaacggcgcctaccgtccgcgcgccacttacacg
atcctcaccgcccggggcggcatagagggccggttcgacgatgtgaggtcgaccttcgcc
ttcctgacgcccagccttggctacacgccccatgccgtcacgctgacgctggagcgcaac
gacgtccgcttcgatcaggtcgccgccaccgacaaccagcgtgcgaccgcggccgcgctg
gaatcgctgtcgtcggacaacggggcctatgatgccgtggtgacggccgacgccgccacc
gcccgtcaggcgttcgacagtctctccggtgagtttcatgcctcgttgcggaccgccctg
atcgaaaacagccggctttcccgcgaagccacgctcgaccagttgcgcacccgccggacg
gctccgggccttgccatgtgggggcaggtgctggatagctcgcggcactggacgggccat
tccggcgtttcgacgctcgcgggggacatgatggggacgctcgccggtgtcgaggcccag
acgcccggcggtttccgcatcggcatgctcggcggccaccaccgcgacgcactgcacggg
cgcggcaatgcggacatcgatggctatcatgccggcgtctatgccggtggcgccagcggc
ccgctggggtttggcggcgggctgatattcggctggcaggatgtggcggcgcaacgcctc
gtgaccttcaacggatttcaggaaggggtgcagtcgcgctatcgcgccacgacgatgcag
gcctttgccgaagccgcttatcgcgtcgatttcgacgagggcgcgctggagccctttgtc
ggcctgacccatgtcgcgctcagcgtcggcagcagccgggaagccggcaatgtcgccgcg
ctggatctggcgcgggacaggttgcgcaccagctacacgacgatgggcgttcgcggccgg
acggccatcccgctcggcggcgcctcgctctcgctgcgggcttcggcagcctggcagcat
gccttcggggatcgaaccggcatgatcgaggccgcgctgggcggcaggcggttcaccatc
accggcgcgcggatcgcgcaggacagtctggtcggcgaactgagcctggacgccgccttg
actcccgctctccgcctgaacctgggctatagcggcgcattgccgcgcggcgcccgggac
agcgtggcgcgcgccgcgctgacctggtcgttttga
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