Sphingobium cloacae: SCLO_1028670
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Entry
SCLO_1028670 CDS
T05301
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo00300
Lysine biosynthesis
sclo00470
D-Amino acid metabolism
sclo01100
Metabolic pathways
sclo01110
Biosynthesis of secondary metabolites
sclo01120
Microbial metabolism in diverse environments
sclo01230
Biosynthesis of amino acids
Module
sclo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCLO_1028670
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCLO_1028670
Enzymes [BR:
sclo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SCLO_1028670
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAV65907
UniProt:
A0A1E1F5Y7
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All DBs
Position
SCLO_1:complement(3293354..3294157)
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AA seq
267 aa
AA seq
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MGRFSKMHGLGNDFVVIDAREDAVGMTAARAHAIADRHGGIGCDQLILIGPSERADVSMR
IFNADGSEVEACGNATRCVPLFVGRDVTIETKAGLLDAKGVEGGASVDMGMPRFDWNAIP
LAYAMDTLSMQASWEDLPAPAAVNVGNPHVIFFCDDLDAVDIPRLGPVIETDPLFPQRVN
VNFAEVVSDHHLRLIVWERGAGLTRACGTGACATAVAAIRRKLMTGPVTVSLPGGDLVID
WTPGGTIRMTGPATHVFDGEADWSRFG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcttttcgaagatgcatgggctggggaacgactttgtcgtgatcgacgcgcgc
gaggacgcggtcgggatgaccgccgcccgggctcatgccattgccgaccggcatggaggg
atcggctgcgatcagctgatcctcatcggtccatcggagcgggccgatgtgtcgatgcgc
atcttcaacgcggacgggagcgaggtggaggcatgcggcaatgcgacccgctgcgtgccg
ctgttcgtgggccgcgacgtgacgatcgagaccaaggcgggcctgctcgacgccaagggc
gtggagggtggcgcgagcgtcgacatgggcatgccgcgcttcgactggaacgcgatcccg
ctggcctatgccatggacacgctctccatgcaggcaagctgggaggacctgcccgcgccc
gccgccgtcaatgtcggcaatccgcatgtcatcttcttctgcgacgatctggacgcggtg
gacatcccccggctcggcccggtcatcgagaccgatccgctctttccccagcgggtgaac
gtcaatttcgcggaggtcgtgagcgaccatcatctgcgcctgatcgtctgggaacgcggc
gcggggctgacgcgcgcctgcggcacgggagcctgcgccaccgccgtggccgcgatccgg
cgcaagctgatgaccggcccggtgacggtcagcctgccgggcggcgatctggtgatcgac
tggacgcccggcggcacgatccgcatgacgggccccgccacccatgtgttcgatggcgag
gccgactggtcgcgctttggatga
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