Styela clava (leathery sea squirt): 120327188
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Entry
120327188 CDS
T07291
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120327188
Spliceosome [BR:
sclv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120327188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
120327188
NCBI-ProteinID:
XP_039249559
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MLGTSSTDWTTSQPTTISNQQMSPIPQQIPVQIKQEIEAKSSTTTVSSTSVVASAREEYT
TAAQATAYQIQIPPPAFGGIPGANIPSHQFPHGVPVPVSGYPINRLQMTAQTIPGQVKLE
SMAQLQHPGMFPQAYIIPNGHAAQEFVQAQQVATGQVVGSAAQVVPPPPPVEGTIPGQLA
MPNGQQMVMVDPNGIPGSVAAMPSLPGNAQVISTAASTTGETPGATTSSASDGSVASHAG
DSSGQSKRLHVSNIPFRFRDPDLRNMFGKYGNIADVEIIFNERGSKGFGFITFETKEEAE
RAKKALNGNIVEGRKIEVNDATARVQTKKPALPLINGLKMAQMVPNLIATDPYAAAVARL
NPVTANAYRQAALLGGRGRSIYQTTALRPGTAIAAPQLAALQSNGLIPVVYESYPTMALS
GAVAGQEFPQAQTFWQSAGIPGLAAAQGTPTAYATLQQMPQYAATRYIAAGTGAVAAAQP
GGTLAYAALPGQVTMAQAVYSNAATAYTTTAGAVAYQAGAVAGATPTAVYADPYQQATLT
PTAQATALAAYRGYRFSPY
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcacgtccagtacggattggaccacatcgcagcctaccactatttcaaaccag
caaatgtctccaattcctcagcagataccagttcaaataaaacaggaaatcgaagcgaaa
agcagtactacaacagtgtccagtacatctgttgttgcgtcggcacgtgaagaatacaca
actgcagctcaggctacagcataccaaattcaaatcccgcctccggcttttggaggaata
ccgggcgctaatattccttcgcatcaatttccccacggtgtgcctgttccagtatcagga
taccctatcaatagactacagatgaccgcacagactatcccagggcaagtgaagcttgag
tcaatggcacaacttcaacatccaggaatgtttccccaagcttatattatacctaatggt
catgcggcacaagagtttgttcaagcacagcaggttgcgacaggccaagttgttggttca
gcggcacaggttgtccctccaccacccccggtggaaggaacaatacctggtcaactagca
atgccaaatggtcagcaaatggttatggttgatccaaatggcattcctggctcagtggca
gccatgccatctttgccaggaaatgcacaagtaatctccacagccgcaagtacaacaggc
gaaactccaggtgcaacgacgtcatcagcaagtgatggttcggtagcatctcatgccggc
gactcctcaggacaaagcaaaaggctgcatgtctccaatattcccttccgatttagggat
cctgacctgagaaatatgttcgggaaatacggcaatattgcggatgttgagatcattttt
aatgaaagaggttctaagggtttcggattcataacatttgaaacgaaagaagaagcagaa
cgtgctaaaaaagcattgaatggaaatattgtagaaggtcgaaaaattgaggtgaatgat
gccacagccagagtacagacaaagaaaccagctttacctctaattaatggtttgaaaatg
gctcagatggtgcctaatctgattgcaaccgacccatatgctgctgcagtagcaaggttg
aatccagtgacagcaaatgcctacagacaagctgccttattaggtggcagaggaagaagc
atttatcaaacaacagcactcagacccggtaccgctattgctgcaccacaactcgcagct
ttacaatcgaatggacttataccagtggtttatgaaagctatccaactatggctctatct
ggagcagtagcaggacaggaattcccacaagcacaaacattctggcaatctgccggaata
ccaggcctcgcagcagcacaaggtacacctacagcttatgcaacactacagcaaatgcca
cagtatgcagcaacgaggtacatagctgctggcacaggagcagttgctgctgcacaaccg
ggtggtacacttgcttatgcagctctaccaggacaagtcaccatggcccaggctgtttac
tcaaatgcagctactgcttacacaacaacggcaggagctgtagcttaccaagcaggtgca
gtagctggagccacaccgactgcagtctatgctgatccataccaacaggcgacgctcact
ccaaccgcacaagctactgcactggctgcttacagaggatatcgtttttcaccttactga
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