Styela clava (leathery sea squirt): 120328032
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Entry
120328032 CDS
T07291
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120328032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120328032
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
120328032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
WHIM1
Motif
Other DBs
NCBI-GeneID:
120328032
NCBI-ProteinID:
XP_039250350
LinkDB
All DBs
Position
Unknown
AA seq
1677 aa
AA seq
DB search
MDTEIENHPDFAVVWSFFGKFGKHLDLEDILLADITSWISEPWTKTSKVVDMMVKLMRKT
GMRVDKQRWQKFITKAALKYDWELAVELQTAGFQTLSISRKLKILKMICEMQFDDNMKFK
SVINTEEADDQRLKPVGRDEEGLLYWHQEDTDLNIRLYIEDEDDDDYTGWKVVCRTKDEI
GNLISKLTDEPAHKVKGENSDEEEDIVETKFQIFLKTQCSSDATEDKMKKFLQTNIEKSI
DEDVSANMKLENAEYSKDNDESKSVKEGSKSAIEDENSSNIKQENISIKREKDSSHLLDL
KNDESSSLKTVDNFEESKSETKIKLEPINSQTVEDVNIKITPAEPNTTGDEKAESCDTNI
ESSKPLQQGNNEGFVASPNINTENTINEMSTVPKLLEQNDSNDKFKSCPVSVIMSTVSTE
NVSVIPSQNQEVSSETSKSSVTINEKKSNLESTTTGKDIENKDIKNSTVNAPAQSCDQQI
GSETSKSSATISGNVNNIESATTGKDIENKDMENSSENAPAQSCDQELGSETSNCTVTIS
KKKNNLGSVTTGEDIENKEMENSTENAPFDQSRDQELGSEIKKSASTMSKNENNFESCEI
DKQKGLDIQNKDASNYEKNDSVQSVNTSEPLEEKGSVSHDTDKIAKSIENNSKNSLPVQA
DDSETKNEKEQIVTMAAQSIYEMKSQKSDESTVEIKSEIAKIENKGNVSGRENLIENSCP
PQSDNGVVKENGLEIKTTEKTVSSVGMDDIASVSQPIATEKGIENSGNKNDDIGLPPTTN
STDKGLIKSDVKSSSIDILSSDKNTLMKSEIIENVDKTSSLKSNVLASESVDSIPHADLT
ESINISHKSPVHSDDETEIKSMNLIEPAMSKNTDEVLSPPTANEVIEESPMIQKHSLNTC
SLPEKESPTDKIVNKTPGDIENREKPQTNITLGSQDDSFDSSKKNTEISSETDKQKYNQM
NKQNANSSIENEVASNIKTIDSNSDTKPSVDNLDKKLTQKQSTKSETKSESQDDKDKAIT
ELVDDKSPDKIADSAENVTVKEENAEVAENGQIKCLTECNQDTGDKIFNGESENTREETN
KDQEEKENNEENVEEIKEKKSTTRKRGRKRRSGFGRKKPASAKKSTPSDTKRQQNHKPKK
PKLSKLEQLKSEAENILYKEKNSKHSEGVAYTTRSGRRVKSAKQEETEAWQTIEDDSTSK
KKKKDSDVDEDFEYVEKKKSSGGSHRTERVKEEPKKEVKRVINDDTPCMKCGLFSHPETI
LLCDGCDKGHHMACLTPPLMIVPYEEWFCPKCSQEKLIKRLKEIYEELDSKLKLHQRKTR
QNEYKKLLNEYTGISQTNILPEKPAPVKSRPPPKKRRRSYSSESEDLYSSEPSSPEVITT
RRCRTKVSYDFSTFDKTIMDAIKDDIDIKSDEQVEKPISGKDIRTIIAAEKGEDVDEMGD
DDTTPGRRKKRKLTNLNTSGSEAAESGSNYSISASEEEPSDEEFQLSGVTDSDDSLGGKR
RSKRKKRPYVKPIKRSKRLRRKRIQEEYETSLSESSEYEEAAPKRTKTKKKKRFNQYGRD
STEDEYVPPRRVNKVQEFIDDEEEENEEKNVKKPRRSRTLQSSSEEGDENKNKNSDIKIV
QNGKMTESRQMIGVLSLRMLLELQKMTVISQMPNQLKIKLLIHNALWWFQARTLISL
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggacacagaaatagaaaatcatcccgattttgcagttgtatggagttttttcggtaaa
tttggaaagcacttggacttggaagatattttgcttgccgacattacgagttggatatcg
gaaccatggaccaaaacttccaaagtcgttgatatgatggtaaaattgatgagaaaaact
ggaatgagagtcgataaacagagatggcagaaattcattacaaaagctgcattgaaatac
gactgggaactcgctgttgaattgcaaactgcaggatttcaaactctttccatttcaaga
aagcttaaaatattaaagatgatttgcgaaatgcaattcgatgacaatatgaagttcaaa
tcagtgataaatactgaagaagcagatgatcaaagattaaagccggttggaagggatgaa
gaaggtcttctctattggcatcaggaggatactgatctgaatattagattatatattgaa
gatgaagatgatgatgattatactggatggaaagttgtctgcagaacaaaagatgaaatt
gggaatttgatcagcaagcttactgatgaacctgctcataaagttaaaggtgaaaacagt
gatgaagaggaagatattgtggagacaaagtttcaaatatttttgaaaactcaatgttca
tcagatgcaacagaggataaaatgaaaaagtttttacaaacaaatattgaaaaaagcata
gatgaagatgtctctgcaaatatgaaacttgaaaatgcagaatattccaaggataatgac
gagtcgaagtctgtaaaagagggaagtaagtctgctattgaagatgagaattcctctaat
atcaagcaggagaatatatcaatcaaaagagaaaaagatagttcacatttacttgatttg
aaaaatgacgagtcatcttcactaaaaacagtggacaattttgaagaatcaaaaagtgaa
acaaagataaaattagaaccaataaattcccagactgttgaagatgttaatattaagatt
actcctgctgaaccaaatacaacaggagatgaaaaggcagaatcttgtgatacgaacatt
gagagtagtaaaccccttcaacaaggtaacaatgagggctttgttgcatctccaaatata
aacactgaaaatacgattaatgaaatgtcaacagttcctaaattgctggaacaaaatgat
tcaaatgataaattcaagtcatgtcctgtaagtgtcattatgtcgacggtttcaacagaa
aatgtttctgttattccgtctcagaatcaagaagtaagttctgaaacaagcaagtcttct
gttactatcaatgaaaagaaaagtaatcttgaatcaaccacaactggaaaagatatcgaa
aataaagatatcaaaaattcaacagtaaatgctcctgctcaatcatgtgatcaacaaata
ggttctgaaacaagcaagtcttctgctactatcagtggaaacgtaaataacattgaatct
gccacaactgggaaagatatcgaaaataaagacatggaaaattcatcagaaaatgctcct
gctcagtcttgtgatcaagaattaggatcggaaacaagcaattgtactgttactatcagt
aaaaagaaaaataatcttggatctgtcacaactggggaagatatagaaaataaagaaatg
gagaattcaacagaaaatgctccttttgatcagtctcgtgatcaagaattaggatctgaa
ataaagaaatctgcgtcaactatgagtaaaaatgaaaacaattttgaatcctgtgaaatt
gataaacaaaaggggcttgatatacaaaataaggatgcctcaaactatgaaaaaaatgat
tcagttcaatctgttaatacttctgaacctttagaagaaaaaggttcagtttcacatgat
acggacaaaatcgcaaaatctattgaaaataatagtaaaaactcgttgcccgttcaagct
gatgatagtgagactaagaacgaaaaagaacaaattgtaacaatggccgctcagtcaata
tatgaaatgaaaagtcagaaatctgatgaatcaacagttgaaattaagagcgaaattgct
aaaattgaaaataaaggtaatgtctccggcagagaaaatttaattgaaaattcttgccca
cctcaaagtgacaatggtgttgtgaaagaaaatgggcttgaaataaaaacaactgagaaa
acagtttcttctgtaggtatggacgatattgcttctgtatctcaacctattgcaactgaa
aagggaattgagaattctggtaacaaaaatgatgatattggtttaccgcctacaacaaat
agtactgataaaggactgataaagtcagatgtaaaaagttcaagtatcgacatcttatct
tctgataagaacacattgatgaagtctgaaattattgaaaatgttgacaagacctcttca
ctgaaatcaaatgttttagccagtgagtctgttgattccattccacatgctgacttaaca
gagagtataaacatttcccataaaagccctgtgcattctgatgatgaaactgaaataaaa
tcgatgaacctgatagaacctgccatgtcaaaaaatactgatgaagtattatcaccacct
actgctaatgaagtcatcgaagaatcaccaatgatacaaaaacattcattaaacacatgc
tcactacctgaaaaagaaagtccaactgataagattgtcaataagacacctggtgatatt
gagaacagagaaaaaccacaaactaatataacactagggtcgcaagatgattcattcgat
tcttcgaaaaagaatactgaaatctcttcagaaactgataagcaaaaatataatcaaatg
aataagcagaatgcgaactcatcaatcgaaaatgaagttgcatcaaacataaagacaatt
gattcaaatagtgataccaaacctagtgttgataacttagataagaaattaactcaaaaa
cagtctactaaatcggaaactaaatcagaaagtcaagatgataaggacaaggcaataact
gaacttgttgatgacaaatcacctgacaagattgctgattcagcagaaaatgttactgtg
aaagaagaaaatgcggaggttgcagaaaatggtcaaatcaagtgtttaacagaatgtaat
caagacactggagataaaatttttaatggtgaatcagaaaatacgagagaagaaacaaat
aaagatcaagaagaaaaagaaaataatgaggagaatgtggaggaaataaaagaaaagaaa
tctacaactaggaagaggggaagaaaaaggagatctggttttggtagaaaaaagcctgca
tctgcgaagaaatcaacacctagcgacacgaaacgacaacaaaatcataaaccaaagaaa
ccaaaactaagtaaacttgaacaattaaaaagtgaagctgaaaatatactatataaagaa
aaaaattccaaacacagtgaaggagtggcctatactacaagaagtgggaggagggttaaa
agtgcaaagcaggaagaaactgaagcatggcaaacaatagaagatgacagtacttcaaaa
aagaaaaaaaaggattctgatgttgacgaagactttgaatatgttgagaaaaagaagtcc
agtggtggaagtcatcggacggaaagagtcaaagaagaaccaaaaaaagaagtaaaacga
gtaataaacgacgatactccgtgcatgaaatgtggattgttttcacacccagaaacgata
ttactatgtgatggatgtgataaagggcaccacatggcatgcttgacacctcctttaatg
attgtgccgtacgaggaatggttttgtcctaaatgtagccaggagaaattgatcaaacga
ttgaaagaaatttatgaagaactcgacagtaaattaaaattacatcaaagaaaaacaagg
cagaatgaatataagaaattattaaatgaatacacgggcataagccaaacaaatattcta
ccagaaaagccggctccagttaaatctcgaccccctccaaagaaaaggagacgttcgtat
tcaagtgaatcagaagatttgtattcatctgagccgagtagtcctgaagtaataacaaca
cgacgttgccgaacaaaggtttcatacgatttttcgacttttgataaaacaatcatggat
gcaataaaagatgatatcgatattaaatcagacgaacaagttgagaagcctatatcaggc
aaagacatcagaacaataattgctgcagagaaaggtgaagatgttgatgagatgggagat
gatgacacaacacctggtcgtaggaagaaacgaaaactaacaaatttgaatacaagtgga
agtgaagcagctgaatctggcagtaattacagcatatcggcatctgaggaggaacccagt
gatgaggaattccaactttctggagttacagacagtgatgacagcttaggtggaaaacgg
agatcaaagaggaagaaacgtccgtatgttaaacctattaaacgttcaaaaagacttaga
agaaaaagaatacaggaagaatatgaaacaagtctttcagaatccagtgaatatgaagag
gctgctccaaagaggacaaaaaccaaaaagaagaagaggttcaatcaatatggaagggac
tcaactgaagatgagtatgttcctcctcgacgagtaaataaagttcaagagtttattgat
gacgaggaagaagagaatgaggagaaaaatgtgaaaaaaccaagacggagtcggactcta
caatcatcttcagaggaaggcgacgaaaataaaaataaaaacagcgacattaaaatagtg
caaaacggaaagatgacggagagtcgtcagatgattggagttctctctcttcgaatgctg
ctcgaacttcagaagatgacagtaatatctcagatgccgaatcaactgaaaataaaactg
ctaatacataatgctctttggtggtttcaagctagaacactgatttcattgtag
DBGET
integrated database retrieval system
