Styela clava (leathery sea squirt): 120330827
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Entry
120330827 CDS
T07291
Name
(RefSeq) nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120330827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120330827
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120330827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-GeneID:
120330827
NCBI-ProteinID:
XP_039253708
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MATATKNPLKEEVQDAANFVQTFLAADREQLDLSELISATGISSGSISGTHDEDYPNLRL
PQLTDIRNKPLPPELVEQFAHMQCNCIVGIFPEIGRAWLTVDSDIFVWRYADGEDLAYFD
GLSETILSVALVKPKPGIFRDHIKYLLVLTTPMEIVILGVSFAEEDVNGEMHLLPDPLFT
LTSDNVYLVHTVCTETGRIFTGGKDGCLYEIAYQAAGGWFARKCTKINHSRSKLSFLLPT
LVNSWLTDDDSISQIVVDDTRHILYTRSEKGAITVYDLGVDGSSTTCVAQMKMDSIRLRA
SAIASTVAPSNFDQIIHISTISKRESRNIHLVAVSRSGVRMYFMTTAPAPISPPPATNIN
GTPIQTPSTNVADRRPHTLELVHVRLPPGYTASNTNHPMDVHTAHHNAGTLLLASSHADN
DSIWCISRDSFMFEKILTETQISMPIDSRPWVIVEVPEPPSPLSVACLPFGSTEIPPDPP
IQVLQHFQKPSEYVVITAQGCHMFNKLRPVDQLRFLLETRQDPESEAVANFFKLHRNGEA
SVACIILAMSGMAADRILIELAVAAFHRHSGDAFYRYLDQNQGPSTLGQNLPTPHSPYGG
HQAAMSPIPGQRLQDLSVRSPGGLPVISTPMPGVTAPNLTFQPMQSPRISSQATNTAAPA
GVTSELSYSDKFKGLYKMFCRIVRPIWEGRLIVDYVVTQDNRQHTLNINRTEVEILTHIL
SDLNSFKHFMEAHCLSRLPLSGGPAMLPQQRFDSSGLHGQSLMQNALRAQQVQAAHGEAK
LIYALYTLTEHTTQVLGLWRFMCDHEMHMICKTISKETLAMLKNVTFQDFVLDGHQLCSE
MISVIVNRYIDDNSEVDSLNAQLRQICPSLYSLDDVICSRSSELLNSARQTAGSDQVTKL
EECLSLFQRVAHCVNLSLVSQQFQAVGFYTGVVELCATAALKRDERNLALHFYKSCAEPE
ENVEGRIAYEARAECYKVITDMMDDLMLASESQPQAPSVPVQLGPPAPNKQGVTKSTQNL
QAEEAQRYAESCMHLIMRSEDELLHVTIYDWMLRKSLADRLLRISSPYLEQYLKRVTSNH
PDDPFYCDILWKYYERSGDHAAAAKILMKLADKSGNSHDLTRRVEYLSRAKMNGKSATTI
TTASEEGQLLHDLEEKLEVAQLQMQILQTLEELGQTEAVAALNSQLMDITRLYSDYAEPF
QLAECKLAIVHCAGHYDPSLIDALWQNILDQEIAKVQDQINENIVTALSMKVSQLGRKYN
SAMRYFPVEFLVNYLEKVSCQNDWPEGWVFTSLLDAGVEITHLLELYQSVHRQKLPYWSD
HGRPYHILRVIRRILAAFAENPSQYVPAPQRRKFVTNALDIIAVALVELQSTVQSSDHLN
DTKTRFKNLQAQMERLETQVARRY
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagctacaaagaatcctttgaaagaagaggttcaagatgctgccaattttgta
caaacatttcttgcggcggatagggagcaactggatttgtctgagcttatttctgcaact
ggaataagttctggaagcattagcggaacacatgatgaagattatccaaatttacgatta
cctcaactcacagatattcgaaacaaaccactgcctcccgaattagtcgaacaatttgca
catatgcaatgcaattgcattgttggtatttttcccgaaataggaagagcatggttgact
gtagattctgatatatttgtgtggcgatatgcagatggagaagatctagcttattttgat
ggactctctgagacaatattaagtgttgcactagtcaaacccaaacctggtatattcaga
gatcacatcaaatatcttctagtcttgacaacaccgatggagattgttattctgggagtc
agttttgcagaagaagacgtcaacggcgagatgcacttgctaccagatccattgttcaca
ttaacttcagataatgtttatcttgttcacactgtatgtactgagactggcagaattttc
actggcggtaaagatggatgcttgtatgaaattgcttatcaggctgctggaggatggttt
gctagaaaatgtacaaaaattaatcattccagaagtaaattatcatttctccttccaact
cttgtcaattcatggctcacagatgatgattctataagtcaaatagtagttgatgataca
agacatattctttatacaagatcggaaaagggagctatcactgtctacgatcttggtgtt
gatggttcatccactacatgtgttgcacaaatgaaaatggattctattagactgagagca
tcagcaattgcgtccactgttgcaccatctaactttgatcagataattcacatctcaacg
atatcgaaaagggaatcaaggaatattcatcttgttgctgtttctagatctggtgttcga
atgtactttatgacaacagcccctgcgcctatatctccaccccctgccacaaatattaat
ggaactccgatacaaacacctagcacaaatgtggccgacagaaggccacataccttagaa
cttgtacatgtcagattaccacctggatatactgcaagcaatacaaatcacccaatggat
gtccacactgcccatcataatgcaggcactcttcttcttgcatcatcacatgcagacaat
gattcaatatggtgcatcagtagagattctttcatgtttgagaaaattttaacagaaact
cagatatcaatgcctattgatagtcgtccatgggtaatagtggaagtacctgagccccct
tctcctctttcagtagcgtgcttgccattcggaagtacagaaatacctcctgatcctcct
atacaagttcttcaacattttcaaaaaccatcagaatacgttgtaatcactgcccagggt
tgccatatgttcaacaaattgaggccggtggatcagctgaggtttctacttgaaacaaga
caagatccggagtcagaagctgttgctaactttttcaaactccacaggaacggtgaagct
agtgtggcatgtatcatattggcaatgtcaggaatggcagctgacagaatactgatcgaa
cttgcagttgccgcatttcatcgacatagtggtgatgctttttacagatacctggaccaa
aatcaaggcccatctactctcggacagaacttgccaacaccccattctccatacggtggt
catcaagcagctatgtcacctattcctggacaaagactgcaagatttgtctgtaagaagc
ccgggcggattacctgttataagcactcctatgcctggtgttactgctccaaacttaaca
ttccaaccaatgcaaagtcctaggatatctagtcaagcaacaaacacagctgctccagct
ggtgttacttctgagctatcatattctgacaagttcaaaggcctttataagatgttctgt
aggattgtgaggccgatctgggaaggaaggctgattgtggactatgttgttactcaggac
aaccgccagcatacactgaacatcaatagaacggaagttgaaatcttgacccatatcttg
agtgatcttaattctttcaaacatttcatggaagcacactgcctatcaagattaccccta
tctggaggtccagcaatgctgccacaacaaagatttgatagcagtggattacatggtcaa
tcactgatgcagaatgctctcagagctcagcaagttcaagctgcccacggtgaagcaaaa
ttaatctatgctttatatacactgacggaacacactactcaagtactgggattatggaga
ttcatgtgtgatcatgagatgcacatgatatgtaaaacaatatcaaaggaaacattggca
atgttgaagaatgtcacatttcaagattttgttctggatgggcaccagttgtgttctgaa
atgatatcagtgattgtgaatagatacattgatgataattcagaagtggattctctcaat
gctcaacttcgacaaatatgtccttcgctttattccttggatgacgttatttgctcaagg
tcatcagaattgttgaactcagcgagacaaactgcaggttcagatcaagtaacaaaatta
gaagaatgtctttctttgtttcaacgtgttgctcattgtgttaatttatctctcgtttct
caacaatttcaagcagttggtttttacactggtgttgttgaattatgtgcaactgctgct
ctgaaaagagacgaaagaaaccttgctctccatttctataaatcttgtgccgaacctgaa
gaaaatgtagaaggaagaattgcttatgaggcaagagctgaatgctacaaagttatcaca
gacatgatggatgatttaatgttggcgagtgagagtcaaccacaggcaccaagtgttcct
gtacaactaggccctccagcccccaacaagcaaggagttacaaaaagcactcagaatttg
caagcagaggaagcacaacgatatgctgaaagttgtatgcatctcattatgagatcggaa
gatgaattacttcacgtcacaatatatgattggatgttgagaaaaagcctcgccgatagg
ttactcagaatatcatctccttaccttgagcaatatttgaagagagtaacatcaaatcac
cctgatgatcctttctattgtgacatcttgtggaaatattatgaaagatctggtgatcat
gctgcagcagcaaaaattttgatgaaacttgcagataaatctggtaacagtcacgatttg
accagaagagttgaatatttatctcgcgcaaaaatgaatgggaagagtgcaaccactatt
acaacagcaagtgaagaaggacaattattacatgaccttgaagaaaaattagaggtcgct
caactacaaatgcaaatattgcaaactttggaagaacttggacaaaccgaagcagtggct
gctttgaattcacagttaatggacattacaaggctctacagtgattatgcagaacccttc
cagcttgccgagtgtaaacttgccattgtacattgtgctggacattacgatccatctttg
atagatgctctgtggcagaatatacttgaccaagaaattgcaaaagttcaagatcaaatc
aatgaaaacatagtcacagctttgtcaatgaaggtttcgcagcttggaagaaaatacaac
agtgctatgagatattttccagtcgaatttctggtaaactatctcgagaaagtttcatgt
caaaatgattggccggaaggatgggttttcacttctttacttgatgccggtgtggaaatc
acacatttattggaattatatcaatcagtgcacagacaaaagcttccttattggagtgac
catggaagaccttatcacattctgcgagtaattcgaagaattcttgctgcatttgctgag
aacccatcacagtatgttcctgctccacaaaggcggaaatttgttacgaacgcactagac
ataatcgcagttgctttagtagaactccaatcaacagttcaatcaagcgatcatctcaat
gataccaaaacaagattcaagaatttacaagcacaaatggaacgacttgaaactcaagtt
gcaagaagatattaa
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