Styela clava (leathery sea squirt): 120331034
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Entry
120331034 CDS
T07291
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sclv01002
]
120331034
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120331034
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120331034
Peptidases and inhibitors [BR:
sclv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120331034
Ubiquitin system [BR:
sclv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120331034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
PsaD
Motif
Other DBs
NCBI-GeneID:
120331034
NCBI-ProteinID:
XP_039253989
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MTFWDYPTTLSNLPANGAISAADEGRCICIIEDLTSEGSKKHTHTLPVSTTTEQLFEIVA
SKLKYKNSTFTMTFTKSNNSSDYQSITSSKQTLGEMGFEPGKNYVQVARQYGNKPVSSHI
STITEDSGDEATTSETGWSYTNAATGTSNLPDVVALPKPPPIPPKISEGRGHARRNAVGS
DETESFTESISKAASRIKGEEFKGVDNNKESRLIGLVNQAMTCYLNSLIQTLYMTPEFRN
ALYEWEYKGTEEEAATTIPFQLQRLFLALQTSDKQSVETTDLTKSFGWDSSEAWQQHDIQ
ELCRVMFDALEQKFKESAAAESDDAENDETDENDGKLKEGTDKTVEPEIIKLYEGKMKDY
VQCEECKNETCRNDTYLDIPITIRPFGSATTISSVMEGLKLFVQSETLDQTNQYFCEKCN
KKCDAKKGLKFTSFPYLLTLQLKRFDFDYQTMHRVKLNDRMYFPQLLDLNEFIEDEELDE
NDKDKESISDQASDCVAAELDQNEIELQIEEEGDSSSRDSGNDDDTRPTCRVEGGNRRVA
RVSDDSEEGSSVDEGIDIESQSGQGIGGGNGLDDGPGSGSSTPGAIGGIPKSREWENLHG
TTKPKTEGKYTYELFSVMIHSGSAVGGHYYAYIKSFDDGQWYSFNDQIVSPISQEDIEKS
YGGSGGRSSYSTSFSSSTNAYMLMYRQINPDQNTAFIKTEDLPDHIKKMAEEEEERERKR
IEWKEKEKNMCSIKVFCRSPALLKVHNVANIFESPYEFHNSTLLKDATDQVYKLLKLGEV
GIERHNCRLIKYDHYHQSIEQSLDDEIENQEEPLAKLLGGSRMSYLFDLMMETKENHHQH
FEIYKPGGITLKVFPADYSKECFLDHIIVRMMPDDTIYHLKHVLSKKLHFNHRRIRMAYE
KYTSDISLLSSATQTLREIGLFRTAKVYVDLMNDDELADSLKLEENETSRKYASPKALLK
ETRLWGLIDRTANLINVEVILPEDAPVYVLPPSRPRSPVQPESPGSSTGSLPPLISRSPP
AEVKICPEAPPGSVRSTPSSDEGVGSYDGSSGTNTAPKTAEGSQTASPRERAQPAQCLAA
LSSLGTQTDERTIFWRSPEQQAYLNDADEYSGLNDVEQVENEDQPANSLHLRRNSEEDEG
CSTGSPGNFNLTQGDFKAELDRKLLAASYNRASPTSSLRCEDGSSDSASQTSGEFEIQET
VRHQGDGAADSAGSCSTIDSTGTLCNTGEELTYFGPKTEDETLPIYSYSRDNDECGYPYI
PPTLPSATKISTLPGMARPVTDTGFHRSFEETSSDYYDGRIENNEFSANEYTAESVNGYC
VCAKNNDYANSVRSVPDGATSNTGQATYAYQDTGPGYLCSNCGNVKRETQFEGICCGNIE
ILEEPEEVSCGNIQEDPESGESMDNITPLFADIGRTSEVGAGDCTEESTKPKYLEMTSLN
NLDLGAETSRQRTESSSSALSDLGWGDSTHQTTQQQICYFRITGVSVNQQKCQVLKAQLD
KRTTVSALKRKLHPIVQISTRDFSIYRVYTGGQETELNTLSETFTLISNDSQLKIKHQRA
LRKDEHRCKIFHLNLAEDDPIKNLVEWVVRKGSSIKEAQQTVADELFKECEMKVDPEKIR
LRKKCWRNPGKIFLETDVFGTDIIIASNPDIFLEILEEPEKKVSHTQIAVYCRRWRPSTL
TLDRIEEVILDPDTNNHHSVEELKNKLAILSGLDAADIQWTKPRGLFPCHTSVLEIHDGL
DWEPAFVSYLGSASTSISEDGAIIFYRDKNELVKELSDTERTELQQKEAARLSIAKSSTS
AGSKNSSTTIRPYSRKEKALKIYTVTNNKKKRDNTTTL
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgacgttctgggattatccgacgacgttatcaaatctgcctgctaatggggcaatatct
gctgcagatgaaggtagatgtatttgtattattgaagatttaacttcagaaggaagcaag
aaacacactcacactttgccagtatctactactactgaacaattgtttgagattgttgcg
agcaaattgaagtacaagaactcaacattcacgatgactttcacaaaatctaataattct
agcgattatcaatcgataacaagttcgaaacaaacgttaggtgaaatgggatttgagccg
ggaaaaaactatgttcaagttgcacggcaatatggaaacaaacctgtttcttcacatatt
tctacaattactgaggattctggcgatgaagcaacaacatcagaaactggatggtcgtat
accaatgctgctacaggaaccagcaatttgccggatgttgttgctttgcctaaacctccc
cctataccaccaaaaataagtgaaggacgaggtcatgccagaaggaacgctgttggctcg
gatgagactgaaagcttcacggaaagcataagcaaagcagcttcacgaatcaaaggcgaa
gaattcaaaggtgttgataataataaggaatctagattgataggacttgtgaaccaagct
atgacctgctatctgaacagtcttattcaaactttatatatgacaccagagtttaggaat
gccttgtatgaatgggaatacaaaggtacagaagaagaagcagcaacaacaattcccttc
cagttacaaagattatttcttgcgttacaaacttctgataaacaatctgttgaaaccact
gatcttactaagagctttggatgggacagcagtgaagcctggcaacaacacgatatacag
gagttatgtcgggtcatgtttgatgcattggaacaaaagttcaaagaaagtgctgcagct
gaatcagatgatgccgaaaatgatgaaacagatgaaaatgatggaaaactgaaggaagga
acagacaaaacagtcgaaccagagattataaagttgtatgaaggaaaaatgaaagattat
gtccaatgcgaagaatgcaagaatgaaacttgtcggaatgatacatacctcgatattccg
ataaccattcgaccatttggaagtgccactactatttctagtgtgatggaaggattgaaa
ttatttgttcagtccgaaactttagatcaaacaaaccaatatttttgtgagaaatgtaac
aagaaatgtgatgcaaagaaaggattgaagttcacatccttcccgtacctacttactttg
caactgaagagatttgattttgattatcaaaccatgcatcgggtcaagttaaatgatcga
atgtattttccacaacttctggatttgaatgaattcatcgaagatgaagaattggatgaa
aacgacaaagacaaggaatccatctcagatcaagcaagtgattgtgttgccgcagaactc
gatcaaaacgagattgaattacaaatagaggaagaaggggatagcagcagtagagacagt
ggcaatgatgatgacactcgtcctacatgcagagttgaaggtgggaacaggagggttgcc
agagtttctgatgatagtgaagaaggaagcagtgtagatgaaggtatagacatcgagtca
caatctggtcagggcattggaggaggaaatggattagatgatggaccagggtctgggagt
tcgactccaggtgctattggtgggattccaaaaagccgggaatgggaaaatcttcatgga
actacaaaaccaaagacagagggcaaatacacttacgagttgttctcagtgatgatacat
tctggcagtgcagtaggaggacattactatgcctatatcaaatcattcgatgatggccaa
tggtacagcttcaacgatcagattgtttcaccaatatcgcaagaagatattgagaaatca
tacggaggatctggtggaagaagttcttattcaacatcattctcaagttccacaaatgcc
tacatgttgatgtacagacaaataaatccagatcaaaatacagcttttataaaaactgaa
gatcttcctgatcatatcaagaaaatggctgaagaagaggaagagagagaaaggaagaga
atagaatggaaagaaaaagaaaaaaatatgtgcagtataaaggtgttctgtcgttcccca
gcgcttctaaaagttcacaacgtagcaaatatatttgaatcaccttacgaatttcataat
tcaactttattgaaagatgcaactgatcaagtttataagctgctaaagcttggtgaagtt
ggtatcgaaagacacaattgtcgtctcatcaaatatgatcattatcatcaatcaatcgaa
caatcattagatgacgaaattgaaaaccaagaagaaccactcgccaagttattgggagga
tcgagaatgtcttatttgtttgatctaatgatggaaacaaaagaaaatcatcatcagcat
tttgaaatttataaaccgggaggaatcaccctgaaggtatttccagctgactacagtaaa
gaatgtttcctggatcatatcatagtcagaatgatgcctgatgatactatttatcatctt
aaacatgttttatcaaagaaacttcacttcaaccatcgacggataagaatggcatatgag
aaatatacgagtgatatatctctactatcatctgctactcaaactttgagagagattgga
ttattcaggacagctaaggtctatgttgatttgatgaacgatgatgaattggcagattct
ttaaaacttgaggaaaatgaaacaagcagaaagtatgcaagtcctaaggctctgttgaaa
gagacaagattgtggggattgattgatcggactgctaacttaatcaatgttgaagttatc
ttacctgaagatgcaccagtctatgtgttacctccttcacgacctcgatctcctgttcag
cccgagtctcctggaagttcaacaggatctctacctcctctgatcagcaggtcgccccct
gctgaagtgaaaatctgccccgaagcaccaccagggtctgttcgttctactccttcaagt
gacgagggtgtggggtcttacgatgggagtagcgggaccaatacagcacctaaaactgca
gaaggctcacaaacagcatcacctagagagagagcacaacctgcacagtgtttggccgca
ttgtcttctttgggtacgcagactgatgaaagaacaatattttggagatcgccagaacaa
caagcatatctaaatgatgctgatgaatattctggactcaatgatgtagaacaagttgaa
aacgaggatcaacctgcaaattctcttcatctcagacgtaacagtgaggaagatgaaggc
tgttctactggttcgcctggtaatttcaatctcacacagggagattttaaagcggaatta
gacagaaaacttcttgctgcaagttacaatcgagcgtcaccaacaagttccctgagatgt
gaagacggatcatcagacagtgcttcacaaaccagcggtgaattcgagatccaagagact
gtcagacaccagggagatggcgctgcagacagtgctggaagctgctcaaccatcgatagc
actggtacgttatgcaataccggggaggaactaacttattttgggcccaaaacggaggac
gagactctgcctatttattcctactctcgggataacgacgaatgtggctacccatacatt
ccaccgactttgccgagcgctactaagatttccactttgcctggtatggcacgaccagtt
acagatacaggttttcacagatcgtttgaggaaacttcttcggattattacgatggtcga
atcgaaaataacgaattttctgcaaatgaatatactgctgaatcagtgaatgggtactgt
gtatgtgctaaaaacaatgactatgcaaattcagtaagaagtgtgccagatggcgctact
tccaatacaggccaagccacctatgcgtatcaagatacaggtcctggatatttatgctcc
aattgcggaaatgtcaaacgagagactcaattcgagggaatatgttgcggaaacattgaa
attctcgaagaacccgaggaagtttcatgcggcaacattcaggaagaccctgaatccggg
gagagtatggataatattaccccactttttgccgacataggtagaacttcggaagttgga
gctggggactgtactgaagaatcaaccaaaccaaaatacttggaaatgacaagcttaaac
aatcttgatctgggtgctgaaacaagcaggcaacgaactgaatcttcatcatcagcattg
tcagatctgggatggggagattcaactcatcaaacaactcagcaacaaatttgttatttt
cgaattactggggtttctgtcaatcaacaaaagtgccaagttttgaaagcgcaattggac
aagcgaacaacagtgagtgccttgaagcgcaaacttcatccgattgtacaaatatcaaca
agagattttagtatatatagagtgtatactggcggacaagagactgagttgaacacactg
agtgaaacattcactctgatatcaaatgattctcagttgaagatcaaacatcaacgtgcg
ttgagaaaggatgaacacagatgtaaaatatttcatcttaatcttgccgaagatgatcct
atcaagaacttagtagaatgggttgtaaggaaaggatcaagtatcaaagaagctcaacaa
actgttgccgatgaattgttcaaagaatgcgaaatgaaagtcgacccagagaaaatccga
ctccgcaaaaaatgttggaggaatcctggaaaaatattcttagaaactgacgtttttgga
acagatatcattattgcgtcaaatccagatatttttctcgagatattagaagaacccgag
aaaaaggtaagccatactcagatagctgtctactgccgacgatggagaccttccacattg
acccttgaccgtattgaggaagtgatcttagatccagacacaaataaccatcattccgtg
gaagaattgaaaaataagttggcaatattaagtggtttagatgctgctgatattcaatgg
acaaagcctagaggattgtttccatgtcataccagtgtgttagagattcatgatggtttg
gattgggaaccggcgtttgtttcttaccttggctctgcttcaacgagtatcagcgaggac
ggtgctatcattttctacagagataaaaatgaacttgtgaaagaactcagtgatactgaa
agaacggaacttcaacagaaagaagctgcaagattatccattgctaaaagcagtacaagt
gcaggatctaaaaattcaagcactacgatccgtccatattctcgcaaagaaaaagcatta
aagatatacactgtgacaaataataagaagaaaagggacaacacaacaacactgtag
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integrated database retrieval system
