Styela clava (leathery sea squirt): 120333975
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Entry
120333975 CDS
T07291
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120333975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120333975
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
120333975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_19
TPR_14
TPR_11
TPR_1
TPR_8
TPR_17
ANAPC3
TPR_16
TPR_7
TPR_10
FAT
BTAD
GatB_Yqey
TPR_5
Motif
Other DBs
NCBI-GeneID:
120333975
NCBI-ProteinID:
XP_039257339
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
MSTKEIKSALKAAKTSIQAKDFQTALQHCELVLKKDAHNYNALVFAGLCYSGTNQNEKAR
EKYKVAIESQPDQILAYHGFANLYMKHWKKKKTKEELDELISINEKLLKLTDKKDTNKRR
ELLLNLCNVNIEAELFIKTLQIISDELDVNDSEEDCTTSPFHEIVCKALEKFSGTDWTDF
GKFSGLIEKSFNYLLQSPSNETKEIMSYLKTYVKFLQNNSNILEEKLTNLLDVCVGLHNK
YPDEILLMEIIVQAHLRNYDHSGLPDLHNLVAKLKDSSSNFAELGVAFVEYKDGNFEKAV
TSLSDAMNANPTYMPGWIILCETLVKLRKFTDLRQFARTALLQYKQISSHGKPTWLLPII
PLDVIQYELSKNLATGLCGSHIENEIMKSIGTFEKLVLRKPNDLSLHIRMTEGFIKLNEY
DKASDSIKKAFDIDSNYFEVKAWTEYIRFKTEDEPSAAISRLRNIAPPSGLSRFLLGKAM
WEAGGEYRTEKKNCFTALVEAAKDDPYRSEIFFLLGHFYSKVQHNLSRARGCYQKAYSLD
QSHEETAVCLADAYIAEGDTTSAIKLYENITKGFGSTGGKWAWLRLGLCKLKAKDISNAI
KCFLSALRIDADDAICWECLGEGYLQRGSYSASWKAFDRAHQLNPKSVYSLYQMAKVKQV
QGLYADAIVEYNEVLNLMEDYVPALQGLAESELSLGRHMFHEGRYQTGIEHFEKAIMNLT
VACSLRKDLCCLWKLLGDCCVMVQSLDVSVLQLNVPTIFLNPNDKDIENTMKAGKNEILS
LSTKFYCRAIQIQPDNGSLWHDLGLSYFRRAEESRKNARDNIGEMADNAVNAMKKAITLE
SSNHLFWNSLGVIAASGFIKDPALAQHCFLTSIKHEQNNVEAWSNLATLYLSHDHIKQAH
EAFKVAQSLEPSFVNSWVGQALIAETIGSNETMDLFRHSTELGSQKQGGIGYSSWVARVI
ADTSNPESSLFKENIRNMNAVTTATTQMSKLCDKNSNCPWSSTIHGFLLEHSGLNRSAES
AYRQSYNALENMVSKDEKDEKNLTMKKFNSVANLARISSKNGSHNEAISLYEEILSSPFI
NFYDVCELALAYYKSGKFDKALASYEKAGQLVSSDDDKAQVMVAMAMTYWKMGKHDEAKT
LLYQCFQKCKAGLRALLSLGIATGDKTLVGAAVGELINKKSANSDDVGDDCLLIASAAEL
CEDDKLALSQVQKALHLHPFSWSLRILLCRLLVHLPGCTADRSAPVISTQAKFLFDQQCV
TNPLNRDSQQWKGSLRHKNGVTILKCTAMSTVSAGSHKTSSGIHQEMKEKLRKAQKFAHM
HPYDPSAWSLLCCASHGNDVVEWLQDKPANNNGLVESLSQQALDTSSSTAKREIESWCGS
ITAWNKTLTGADVDCKVMVTDSTKFINLLSNASCTIDKSKLQSIFKEITNIIGKTTDPGK
SSKYFGELLEHLGMFQVSKKMFEKSITLNNSNPMEQLSTFFRIIQLAYKALFKDETKAKE
WLEVMKNVVCEIIKIDVKSPQSLFIQGLVLRMDKNHRKSRSLFNRVLNSTEIISDDTRSL
ATWYQYRNLHERNDTTEIQKLVEKALEGNDQHIARIVGILPVN
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaaagaaattaaatcagccttgaaagctgcaaaaacttcaatccaagccaaa
gattttcaaactgctcttcaacattgtgagttggtgctaaagaaggatgcacacaactat
aatgcactggtgtttgccggcttatgttattctggaacaaatcaaaatgagaaagcgaga
gagaaatataaagttgcaattgaaagccaaccagaccaaatcttagcttaccatggtttt
gcaaacttgtacatgaagcattggaaaaagaagaaaacaaaggaagaattggatgaattg
atttcaattaatgagaagttactgaaactcacggacaaaaaagatacaaataaaagaaga
gagcttcttctcaacttatgtaatgttaacatagaagctgaactcttcattaagacatta
caaatcatttctgatgaactggatgtcaatgatagtgaggaagattgcacaacatcacca
tttcatgaaattgtttgcaaagctttagaaaaattttcaggaacggattggacagacttt
ggcaagttttctggtttgattgagaaatcgttcaactatttactccaatcaccttccaat
gaaacaaaagaaataatgtcatatcttaaaacttatgtcaaattcctacaaaacaactca
aatattttggaagaaaaattgacaaatttactcgatgtttgtgtgggactgcataataaa
tatccagatgaaatactactgatggaaattatagtgcaagcacatcttcgaaattatgac
cattctggtctccctgacctacacaatttggtcgcaaaactgaaagactcttccagtaat
ttcgctgagcttggagttgcttttgttgaatataaagatggaaattttgagaaagctgtg
acgagtctcagtgatgctatgaatgcaaatcctacttatatgcctggttggataatattg
tgcgaaactttggtgaaactgcgtaaattcactgatttgagacaatttgccaggaccgca
ttgcttcaatacaaacaaatatcttcacatggtaaaccgacttggttattacctataata
cctttggatgttattcaatatgagttaagtaaaaatctggcgactgggttgtgtggatca
catattgaaaatgagatcatgaaaagtatcggaacttttgagaagctggttctcaggaag
cccaatgacttgtcactacatattaggatgacagaaggctttattaagttgaatgaatat
gataaagcatcggattctattaaaaaagcttttgatatcgactcaaattattttgaggta
aaagcatggacggaatatattcgtttcaagactgaagacgagccatcagctgcaatcagc
agattgcgaaatattgctccaccgtcaggtttatcaagatttcttcttgggaaagctatg
tgggaagcaggtggtgaatacagaactgaaaagaagaattgcttcactgctttagttgag
gctgccaaagacgacccatatcggagtgaaatattttttttgctcggccatttttattcc
aaagttcaacacaatctctctagagcaagaggttgttatcaaaaagcttattcattggat
cagagtcatgaggaaactgcggtctgtctcgctgatgcatacatagccgaaggggacaca
acttcagcaatcaagttgtatgaaaacatcacaaaaggattcggctcaactgggggaaag
tgggcgtggttgaggcttggtttatgcaaattaaaagcaaaggatatttcaaatgctatc
aaatgctttctatcagctctgagaattgatgcagatgatgctatttgttgggagtgcctg
ggagaaggctatctacaacgcggtagctattctgcatcatggaaagcattcgatcgagct
caccaactcaatccaaagtctgtttacagtctttatcaaatggcaaaagtaaaacaagtg
caaggtctatacgctgatgctattgtggaatataatgaagttttaaacttaatggaagac
tatgtacctgctctacaaggtttggcggagagtgaactgtcacttggacgacatatgttt
catgaaggtcgatatcaaactgggattgaacattttgaaaaagcaataatgaatctgaca
gttgcttgctctttaaggaaagatctttgttgtctttggaagttgcttggagattgctgt
gttatggtacaatcactagatgtcagtgttttgcaattaaacgtacccacgatcttcttg
aacccgaatgataaagatattgagaatacgatgaaagctgggaaaaatgagattctctcc
ctcagcactaagttttattgtcgagcgattcagatccaaccagacaacggatcattatgg
cacgatcttggtctcagttatttcagaagagctgaggaaagtagaaagaatgctagagac
aacataggagaaatggctgataatgctgtgaatgcaatgaagaaagcaatcactttggaa
tcatcaaatcatttattttggaacagtctcggtgttatcgctgcttctggttttataaaa
gatccagctcttgcacaacactgttttctcacttcaataaaacatgaacaaaataatgtt
gaagcatggagtaatctggcaaccctgtatttgtctcacgatcatatcaaacaagctcac
gaagctttcaaagttgctcagagtttggaaccctcgtttgtgaatagttgggtcggtcag
gctctcattgcggagacaataggaagtaatgaaaccatggatctgttcaggcattctaca
gaacttggatcgcaaaagcagggtggaattggttacagttcttgggttgctagagttatt
gctgacacatcaaatcctgagtcatcactttttaaggaaaatatccgaaacatgaacgct
gttaccacagcaacaactcagatgtcaaaattgtgtgacaaaaattcaaactgtccttgg
tcttcgaccattcatggctttctactggaacattccggtttaaaccggtctgctgaatca
gcctacaggcaatcatataatgcgttggaaaacatggtttctaaggatgagaaggacgaa
aaaaatttgacaatgaagaaattcaattctgttgcgaatctagcaagaatatcaagcaaa
aatggatcacataatgaagcaatatcactttatgaagaaattttatcgtcaccatttata
aatttttacgacgtctgcgaacttgcacttgcttattataaatcgggaaaatttgataaa
gctcttgcttcttatgaaaaggccggacaactagtatcttcagatgatgacaaagcacaa
gtcatggttgctatggcgatgacatattggaagatgggaaagcatgatgaggcaaaaact
ctgctttatcaatgttttcagaaatgtaaagctggattgagagcgttactttcacttgga
attgcgactggagacaaaactcttgtcggggcagctgtcggtgaattgattaataaaaaa
tcagcgaattctgacgatgttggtgacgattgtttattgatcgcttctgcagccgagtta
tgcgaggacgacaaacttgctctgagtcaagtacagaaagctttgcatttacatccattt
agttggtcattacggattctactctgtcgtttgttggttcatttacctggttgcactgct
gaccgttctgctccagtaatctctactcaagcaaaattcctatttgatcaacagtgtgta
acaaatccactgaaccgtgacagccagcaatggaaaggatccttaagacataaaaatggt
gttaccatattgaaatgtactgccatgtcaacagtctctgctggaagtcacaaaaccagt
tctggcattcatcaagaaatgaaagagaaattacgcaaagcccaaaaatttgcacatatg
catccttatgatccttcagcatggagtttattatgttgtgcttctcatggaaatgatgta
gtggaatggttgcaagacaaaccagcaaacaataacggacttgttgaatctttatcacaa
caagcacttgacacatcttcttcaactgccaagagggaaatagaatcttggtgtggaagt
atcactgcatggaataaaactttaactggtgctgatgtagactgcaaagtaatggtcact
gacagcacgaaattcataaatttattgagtaatgcatcatgtacaattgataagtccaag
ttacaatcaatattcaaagaaataacgaatattattgggaaaaccactgatccagggaaa
tcttcgaagtattttggtgaacttttggaacacttaggaatgttccaagtttcgaaaaaa
atgttcgaaaaatcaatcacattgaacaactcaaaccctatggaacaattatctactttt
ttccggattattcaacttgcgtataaagcattattcaaagatgagacgaaagccaaagaa
tggttggaagttatgaaaaatgttgtttgtgaaatcattaaaattgatgtgaaatctccg
caaagtttgttcattcagggactcgtgctgaggatggataaaaatcacaggaaatccagg
tcgctgttcaacagagttctcaattcaactgaaataatttctgatgatacaagaagtctt
gcaacctggtatcaatacaggaatttacatgaaaggaatgatactactgaaatacagaaa
ctggttgagaaagcactggagggaaatgatcaacatatagctagaatagttggaattctt
cctgtcaattaa
DBGET
integrated database retrieval system
