Styela clava (leathery sea squirt): 120339447
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Entry
120339447 CDS
T07291
Name
(RefSeq) bromodomain and WD repeat-containing protein 1-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120339447
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
120339447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Bromodomain
ANAPC4_WD40
NBCH_WD40
WD40_like
STAT_alpha
Motif
Other DBs
NCBI-GeneID:
120339447
NCBI-ProteinID:
XP_039263510
LinkDB
All DBs
Position
Unknown
AA seq
1905 aa
AA seq
DB search
MSSGINEGTNRPDIELDLYFLIARFLSQGPCTEAAKTLILELEKNGLLHKDISWTGETKR
PTFEHSLSTFRDISPDFLFQVCQRLGPLLNNSSPPSSVAKSSICGAGRYSFLRNEKTVVP
TRWSSRSFSACVEGRPLVPPHNFSPSHNWALGIFGREHGGTKFKNLLRPTKTLYGKMKLH
RRVLGHLSSVYCILYDRTGSRIFTGSDDCLIKCWSSNKGRLLSTFRGHQSEICDMDISYE
NTILASASCDKEIRIWDIRSGKPITILQSHSAMITSIEFSALVQGETRYLISTGRDGNVC
FWIWNSQTLEFATQPIKFQERNRPGVAMLCSSCSAGGRFIAVGGSDNLVHIYQIPFECGA
TMIGPMTIAEQDEHNNTVDSIWFSHNGLRLISGSKDGTARVWSFEFSTWTSLVLDVSRTF
DSPLDASIIDSNSQTNSKTQNNNNASKINVTMVAWDCNDENVMTSLTDYTIKVWNSVTRK
LLSILKGHKDEAYCLEPHPNDKRILLSAGHDGNVFLWNVDDGSVIMNFHNMLEGLGHGAV
FDAKFSRDGNSFACTDSHGHLLLFGFGDGKPYTKSPVQQFFHTDYRPLIRDQHGYVLDEQ
TQQAPHLMPPPFLVDVDGNPYPTDLQRLVPGREHANDTQTLLPDFLAEQNGLQSPSEDYV
QQNDVENVATVVESDHDPAARSVLDTIIEQMQRVENGEGPSVQDPAPFSSPSSTVGLRRE
GDLAGVRQMHRNAPRSQVASVADIVALTQRVITPQFSQEESERHEYLRQRKGASELLWHR
KERRKRRPISNRRQSRDTTNQPGFSKTPENLRKSSQRRARSNFYKEDPEDEQEQPRSSSR
HRLIRRMRAYAHGYSTRSRAPRRRMSSVAESINEELDNNLEEIEEHSTSASGETSDFLSS
EEDFSQKAKIIRRSKRKKNSKRKKKVNGVVSDVDTSNLRRSVRHRRAPKRLVNSSEGGLS
ETDDETAENTASTGSLFLSPSSNKSKHTKRKEIRKARAQRISSVASSRHEDMETSEDEER
PSTSANCQSNKKVQLTSQTTSNTDNKIKKPPKKEIAKIPFDIIPGQPPPPMYLAPDWIKR
VTPSHFPYVPQMEDEIVYLRQGHEAYISKVINDNVWPVVENELCYNLMNIGHTEPCKVIE
IEYIIGPPTRCEICLLPLNQKVSKKSKKFKVQFHDMPNVVDFLILKDKYDTSVSREWNIN
DRFRSIIDDTWWYGTVVDHSVRDPTYPDSYFQSFSVLWDSENNQEELDYLSPWDMEPIPQ
NISNLIVTRSQNHVSSSNDTLTTHALIGPKELRNVISYRYKRSDWSCDEASDSDDSESES
VEKRMVKESSRIATAIQALIDEKEFTPFASPVNVSIYPLYTIYVAFPTDLSTIQQRLQNR
FYRRSAAFLWEVSYLEKNANAFNEPDSEIVKRAEFLCSLLMRFVQGKSYHDIIELQHEME
DVDHETTDSEADVSEDSDSSVSSIPSIIHSGTEDEVESINQSQGASEYATTAEEDNSNLS
WIEDAKKLLDDVLDARDSRPFRSRVAQHEDDTETLDLVTIQNKLLTSGYTEPKEFFDDVT
LMFSEFKKSNQSREGRSMMARLSPLMSSRINTIIKDWKKNQSKACNGYNGVGVRRSKRRI
RRLSSDLWSPNSKSVSQDSDSFAEPRARKNPNSAVGAYPTRQMLRRRAKKINTVTENGEE
EVQSINSRQNHRKLRGRRLQTVDSDEAGNNEYEGENAESSVANSNHIDESTEINNEQNNH
DKQECSTRAKKRKHSDRDEIGQGDAALSIRQMKRQKRMKSSNHDSTSESEKGNDSDCDFT
INQRVLKSKKHSKTNGHISKQEQSNSNKHSLRPKRQKPTRYNDYSDLSESETETLNHLNT
SSELDNEPRIRSTRTRSKLNYENDESSEEDSENDDVDVLETGESE
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaggtatcaatgaaggaacgaacagaccagatattgaactggatttatatttc
ttgatcgcgagatttttgtctcagggaccatgtactgaagcagccaagactttaatacta
gaattagaaaaaaatggattattacacaaagatatatcatggactggagaaaccaaaagg
ccgacgtttgaacattcattatcaactttccgggacatttctcccgattttctttttcaa
gtttgccaaagattaggtcctttattgaataactcatcacccccgtctagtgttgccaaa
tcatctatatgtggggcaggtagatattcttttttacgcaatgaaaaaactgttgttccc
actagatggagctcaaggtctttttcagcttgtgttgaaggaagacctcttgtaccccct
cataatttttctccgtctcacaattgggcccttggtatttttggtcgggaacatggaggc
acgaaattcaaaaatttactaaggcctacgaagactttatatggcaaaatgaaattacat
agaagggttttagggcatttatcttctgtatattgtattctttatgaccgaactggttct
aggatattcacagggtctgatgattgccttatcaaatgttggtcatcaaataaaggcaga
ttactttcaacttttcggggtcatcaatcagaaatatgtgacatggatatatcttacgaa
aacacaattttagcttctgcaagttgtgacaaggagattagaatctgggacataagaagt
ggaaaacccattacaattttacaaagtcacagcgctatgattacaagtattgaattcagc
gctttagtacaaggtgaaacacgatacctcatttctacgggccgagatgggaatgtatgt
ttctggatttggaattcacaaactttagaatttgctactcagcctattaaatttcaggaa
agaaatcgccccggtgttgctatgttgtgttcatcatgcagtgctggtggacgatttatt
gcagttggaggatctgacaatcttgtccatatttatcaaattccattcgaatgcggtgcg
actatgataggacctatgactattgcagagcaagacgaacacaataatactgtagatagc
atctggttttctcataatggcttacgtcttataagcggctcaaaagatggtacggctcga
gtctggagtttcgagttttcaacgtggacctcattagttttggatgtttctagaacattc
gatagtcctttagatgcaagtattatagactcaaacagtcaaactaattcaaaaactcaa
aataataacaacgcaagtaagataaatgtgactatggtagcatgggattgcaatgatgaa
aatgtaatgacttctttgacggattacacaattaaagtatggaattcggtaaccagaaaa
cttttgagcattttaaaaggacacaaggatgaagcctattgtcttgaaccccaccctaat
gataagaggattttactatcagctgggcacgacggcaatgtctttttatggaatgtcgat
gacggaagcgtgataatgaattttcataacatgctggaaggacttggtcatggcgcagtt
tttgatgcaaaattttcacgggatggaaattctttcgcttgtactgattcgcatggtcat
ttattattatttggatttggtgatggtaagccttatacaaaatcacctgtacagcagttc
ttccatactgattatcggccactgattcgtgatcagcatggatatgtgttagatgaacag
acacagcaagctccgcatctcatgcctcctccatttttagtcgatgtcgatggcaatcca
tatcccacagatcttcagagacttgttcctggaagagaacatgctaatgatacacaaacc
ctgttgccagattttcttgcagaacaaaatggtctacaatctccaagcgaggattatgtg
cagcagaatgatgttgaaaatgtggcaacggtggtggaatctgaccatgatccagctgcc
cgctcagttttagatacgataatagaacaaatgcagagagttgaaaatggtgaagggccg
tcagtgcaagatcctgctccattctcatcacccagctctactgtggggctcagaagagaa
ggcgatttagcaggagtgagacagatgcatcgaaacgcaccacggagtcaagtcgcgtct
gtggcagatatagtggccctaacacaacgtgtcataaccccgcaattttctcaagaagaa
agcgagagacatgagtatttacggcagcgaaaaggtgcgtctgaattactctggcatcgc
aaagaaagaagaaaacggcgaccaatatcgaatcgaagacaatcacgcgatactacaaat
caaccaggcttctcaaaaacaccagaaaatttacgaaaatcatcacagcgcagggcgagg
tctaatttttataaagaagacccagaagatgaacaagaacaacctaggtcatcatcgagg
catcgtttgattcgcagaatgcgagcttacgctcatggttatagtacacgttctagagct
cctagacgacgcatgtcttcagtggcggaaagtattaacgaagagttagataataattta
gaagaaattgaagaacactcaaccagtgcttctggtgaaacttccgatttcttatccagt
gaggaagattttagtcaaaaagcgaaaataattcgtcgcagtaaaagaaagaaaaattcg
aaacgaaaaaagaaagtaaatggcgttgtttctgatgttgacacatccaatttgaggcga
agtgtaagacaccggagggcaccgaaaagactggtaaactcctcggaaggtggtttatca
gaaacagatgacgagactgctgaaaatacagctagtacaggctcgttatttctatcacca
agttcgaataaatcgaagcacaccaaacgaaaagaaatacggaaagctcgtgcacaacga
atctcctctgttgcttcatcccgacacgaggatatggaaacatcggaagacgaagaacga
ccttcgacctctgctaactgtcaatcaaataaaaaagtgcaattaacaagccaaactacc
tcaaatacagacaataaaattaaaaaaccacctaaaaaagaaatcgctaaaattcctttt
gatataattccaggtcagccgcctcccccaatgtatcttgctcctgattggataaaacgt
gtcaccccctctcattttccatatgtgcctcaaatggaagatgaaattgtttatcttcgg
caaggccatgaagcttatattagcaaagtgattaacgataacgtatggccggtcgtggaa
aacgaactctgctataacctgatgaatataggacatacagagccttgtaaagttatcgaa
atcgaatacattatcggcccaccgacccgttgcgaaatctgcctcctccctttgaaccag
aaggtttcaaaaaagtcaaaaaaattcaaagtccaatttcatgatatgcctaatgttgtt
gattttttaattctcaaagacaaatatgacactagtgttagtagagagtggaatataaac
gataggtttcgttctattattgatgatacttggtggtatggaacggttgtcgaccatagc
gtacgtgacccaacttatcctgacagctattttcagtctttttccgtcttgtgggacagt
gagaacaatcaagaagagttagactatctttcaccatgggacatggagcctattccacaa
aacatttctaatcttattgtaacacgctctcaaaatcacgtaagctcaagtaatgatact
ctaacaacacatgcactcatcggaccaaaagagcttcgcaacgtaatttcctaccggtat
aaaagatctgactggtcatgtgatgaggccagtgattcagatgatagcgagagtgaatct
gttgaaaagagaatggttaaagagtcttcgagaatcgcaaccgcaattcaagcgctcatt
gacgaaaaagagtttacaccgttcgctagcccggtcaatgtttctatttatcctttgtat
acaatatatgttgcatttccaacagatttatcgactattcaacaaaggctacaaaatagg
ttttatagacgttctgctgcattcctatgggaggtttcatatttggaaaaaaacgcaaat
gccttcaacgaacctgattctgaaattgtgaaaagagcggaatttttatgcagtttgtta
atgagatttgtgcagggaaaatcatatcatgatattatagaattgcaacacgaaatggag
gacgttgatcatgaaaccacagactcagaagctgatgtttcagaagatagtgattcttct
gtaagcagtattccttccatcatacactccggaaccgaagatgaagtcgaatcaataaat
caatctcaaggtgcgagtgaatatgcgacaacagctgaagaagataattcaaatttgtca
tggatagaagacgctaaaaagttattagatgatgttctcgacgctcgggattcgagacct
tttcgaagccgtgtagcacaacatgaagatgacactgaaacattagatttagttacgata
caaaacaaattgttgacttcaggatacactgaaccgaaagaatttttcgatgatgttaca
ctaatgttttcggagtttaaaaagtcgaatcaaagcagggaagggaggtcaatgatggcg
cgattgtcacctctaatgtcgtcaaggattaacactataattaaagattggaaaaagaat
cagtcgaaagcatgcaatggctataatggggtaggagtacgaagatcgaaaaggcgtatt
agacgtctttcgtctgacttatggtcgccaaattctaaatctgtgtcccaagactcagat
tcttttgcggagccgagggccagaaaaaatccaaattcagcggttggtgcttatccgaca
cgccaaatgttgcgaagacgcgcgaaaaaaatcaacaccgtcacagaaaatggtgaagag
gaggtgcaatcaataaattcaaggcagaatcatcgtaaattaaggggtcggaggttacaa
acggtagattctgacgaagccggtaataatgaatatgagggagaaaatgctgaatcatct
gttgctaatagcaaccatatcgatgaatcaacagaaattaacaatgagcaaaacaatcac
gataaacaagagtgcagtactcgagcaaaaaaaaggaaacattcagatcgagacgaaata
ggtcaaggagacgcagcgttatcgattcgccaaatgaaacgacaaaaaaggatgaagtca
tccaatcatgactctacgagcgagagcgaaaaaggcaatgacagcgattgcgattttaca
attaatcagagagtactgaagagcaaaaaacattcaaaaacaaacggacacatcagcaaa
caagaacaaagtaattcaaacaagcatagtctacgaccaaagagacaaaaacccactcgt
tacaacgattactcagacttatcggaaagtgaaacagaaacgctgaatcatttaaatact
tcttcagaactcgacaacgagcctagaataagatcgacccgaacgagatcaaagttgaat
tatgaaaatgacgaaagttccgaggaagatagcgaaaatgatgatgtggatgttttggaa
acgggggaatcagaataa
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integrated database retrieval system
