Styela clava (leathery sea squirt): 120342659
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Entry
120342659 CDS
T07291
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120342659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120342659
04147 Exosome [BR:
sclv04147
]
120342659
04090 CD molecules [BR:
sclv04090
]
120342659
Enzymes [BR:
sclv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120342659
Transporters [BR:
sclv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120342659
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120342659
CD molecules [BR:
sclv04090
]
Proteins
120342659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_29
AAA_25
AAA_16
Motif
Other DBs
NCBI-GeneID:
120342659
NCBI-ProteinID:
XP_039267520
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MGEATQPKPVASRDGGQSSSSEIKKNEPIPTVPYYKLYRFADGLDYLLVIIGLLAATIHG
SCLPLLFVFFGDLTNSFTEFGKYAACNFTYQTCVDFLLYNGTQEDFDIDSAEAHDLTGNS
VKYVFYFVYIACGVFVCATLQVSTFCYQAVRQSKRIRVAYVRAILRQDIGYHDVTSSGEL
NARLADDVKKIQDGMADKVSLTVQYVCMVLAGFLIAFIYSWKLSLVALSISPFLIVSSAL
IFTLTTKYTTAELDAYANAGSIAEETISSIRTVVAFGIQEEQANRYGDNLGEAKARGIKK
GVISGASIGFLYFTMFGMYALTFWYGVTLVIDENDPLGPGDMMVVFFNILIGASGLGTSG
SNMEYFSAAMAAGQKVFAVIDRIPPIDVFSDKGQKPKNVNGEIEFKNVRFNYPSRAEVEV
LKGVSFTVEKGQTVALVGQSGCGKSTSVSLIQRFYDIVKGDILVDGNDIKKLNVKWLRDR
IGVVAQEPILFDTTIGENIRWGREGVTEDEIIKAARQANAFDFINVLPKKFDTLVGESGG
QMSGGQKQRIAIARAIVRDPKIMLLDEATSALDTESESIVQQALDKAAAGRTTIVIAHRL
STIKNADKIVAFQEGEIAEIGTHDELLKNPDGIYKNLINMQVVNTNRSITPPPEKDGDNR
FSTQTSLKRKSSHKFRRLGSTTGFVTSSHNEFSGDKDDGEGEIEKEDLPDAPFTRIMQMN
KPEGCYIGFGCIFAAMAGSVDPVNAILFASVLTIFTEGDVEKQQYLSVLHACLFLGLGVV
AFIAYTMEATLFSKSGMELTTRLRRKAFESMVRQDISYFDDHKHSTGALCSRLATDASRV
QGCTGVRMGTMLKNFCSLGVALGIAFAYGWKLTLLTIGFVPFLMIGGFLEMALLMGQGDE
DKQIYEEASKIVTEAVNNIRTVASLTKEEKVFQIYNERLEEPAKSANQKALITGLGYGFS
QCVIYFAYAGIFRLGIYLVEIEDMSFEDVFKVLTAVIFGAMAVGQNSSFAPDAAEAQVSA
ARMFKLFDSKPIIDAYSDKGHKPHTCKGNIEFKSLDFTYPTRPDTLVLEGLDVSVPSGST
LALVGQSGCGKSTCIQLIERFYDVVEGGVMVDGSDVKTLNVAWMRQQMGIVSQEPVLFNI
SIKENILLGDKTRSYTDKEVSSAAAGANIHEFISGLPEGYNTKAGAKGGQLSGGQKQRIA
IARALLRKPTILLLDEATSALDTESEKIVQEALDKAREGRTSIIIAHRLSTVKNADIIAV
VDKGKVVETGTHEELLKKRGAYYSLVNAQLTHQ
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagctacgcaacctaaacctgttgcctcgcgtgatggtggccaatcttcgagt
tcggaaattaagaaaaatgagccaattccaactgtgccttattacaaactgtaccgattc
gctgatggattggactacttattggtgattatcggtttgctggcagcaacaattcatggt
tcttgtttacctttgctatttgtcttcttcggggatctcaccaatagttttaccgagttt
ggtaaatatgctgcctgcaacttcacgtatcaaacatgcgttgattttctcttgtacaac
ggaacacaagaagattttgatatagacagtgccgaggctcatgatctaactggaaattcg
gtgaaatatgttttttacttcgtctacatagcatgcggggtatttgtttgtgcaacgttg
caagtgagcacattctgctaccaagcagtacgacaatccaagcgtatccgcgtagcttat
gttagagcaattctcagacaagacattggatatcatgacgtgacttcttccggagaattg
aatgcaagactggccgatgacgtcaaaaagattcaagacggcatggccgacaaagtatcg
ttaacagtgcaatatgtgtgcatggtgctggctggttttctcattgcattcatttattct
tggaaactatctctggttgctctctctatatcgccatttttgatcgtatcgtcagcattg
attttcaccttgaccactaaatatactacggctgaacttgatgcatatgcaaacgcgggt
tcaatcgcggaagaaacgatatcatccatccgcacagttgtggcatttgggattcaagaa
gagcaagctaatcgatatggtgacaatcttggtgaggccaaagcaaggggaattaaaaaa
ggcgtgatttccggcgcaagtatcggttttctatattttaccatgtttggaatgtatgct
ttaactttctggtatggagttacattggtcatcgatgaaaacgatcctcttggccccggt
gatatgatggtcgtcttcttcaatattctgattggtgcttctggtttgggaacgtccgga
agcaacatggaatacttttctgctgccatggctgccgggcagaaagtttttgccgtgatt
gatcgaatacccccaatcgacgtattttcagataaagggcaaaaacctaaaaatgtgaac
ggggaaattgaattcaagaatgtgcgattcaattatccttcccgtgcggaagtggaggtc
ttgaaaggagtaagtttcactgtggaaaaaggtcaaacggttgcattggtgggacagagc
ggttgtggtaaaagtacatccgtcagtctgattcagagattctatgatattgtgaagggt
gatattttggtcgatggaaatgacattaagaagttgaatgtgaaatggttaagagacaga
ataggagttgtggcacaagaacctatacttttcgacaccacgatcggtgaaaatataaga
tggggaagagaaggagtaactgaggatgaaattataaaagctgcaaggcaagctaatgcc
ttcgattttatcaacgttcttccaaagaaatttgacaccttggtcggtgaaagcggtggc
caaatgagcggcggacaaaaacaacgtattgccattgcaagagcgatagttcgcgacccc
aagatcatgttgctcgatgaagctacttcagcattggatactgaaagcgaatccatcgtc
caacaagcacttgacaaagcagccgcaggtcgaacaaccatcgtgatcgctcacagactt
tccaccatcaaaaatgctgataaaatcgtggctttccaagaaggtgaaattgctgaaatt
ggaactcatgatgaattgcttaaaaatcctgatggaatttataaaaacttgatcaacatg
caggtggtcaatactaacaggtctatcacacctccgccagagaaagatggtgataaccgg
ttctctactcagacatcactcaagagaaaatcttctcataaatttagacgtctaggttca
accacaggatttgtaacttcttctcataatgagtttagtggagacaaagatgatggtgaa
ggcgagattgagaaggaagatctgccagatgctccattcaccagaatcatgcagatgaat
aaacctgaagggtgttatattggatttggttgtatctttgctgcaatggctggttctgtt
gatcctgtgaatgcaatattgtttgcttctgttctgactatattcacagaaggtgatgtg
gaaaagcaacaatatttgtctgttttacacgcatgtctgttccttggacttggagttgtt
gctttcattgcttacacaatggaggcaaccttgttttccaagtctggaatggaattgacg
acacgtctacgaagaaaggcattcgaatctatggttcgacaagatatttcatattttgat
gatcataagcatagtactggtgctctgtgttcgagacttgcaactgatgcatcaagagtg
caaggatgtacaggtgtgagaatgggaacaatgctcaagaacttttgctcattaggtgtt
gcccttggaattgcttttgcatatggatggaaattgactttactaacgatcggtttcgta
cctttccttatgatcggaggattcttggaaatggctctgttgatgggacaaggagatgaa
gataaacaaatatatgaggaagcaagcaagatagtaactgaagctgtgaataatattcgt
actgttgcttctttgacaaaagaagaaaaggtttttcagatttacaatgaaaggctggag
gaacctgcaaaaagtgcaaaccaaaaagctctcatcactggtcttggctatggtttctcg
caatgtgtcatttactttgcatacgctggaatatttcgccttggaatatatttggttgaa
attgaggatatgtcattcgaagatgttttcaaggtccttactgctgttatatttggggct
atggcagttggacaaaacagttcattcgcacctgatgctgcagaagcacaagtatcggca
gctagaatgtttaagttatttgattccaaacctattattgatgcgtacagtgataaagga
cataaaccacatacttgcaaaggcaacatcgaattcaaatctctagactttacatatcct
accagaccagatacacttgtattggaagggcttgatgtcagtgtaccatctggtagtaca
cttgctttagttggacaatcaggttgtggaaaatctacatgtattcaacttattgaaaga
ttttatgatgtggtggaaggaggagtgatggttgatggttctgatgtaaaaacattgaat
gtggcatggatgagacaacaaatgggaattgtatcacaagaacctgtcttgttcaatata
agcatcaaagaaaatattttacttggtgacaaaacacgatcatacactgataaagaagta
tcctctgctgccgctggtgcaaatattcatgaatttatatccggtcttcctgaggggtac
aatacaaaagcaggggcaaaaggtggccaactgtctggtggtcagaaacaaagaattgct
attgcaagagctttattgagaaaaccaactatattattattggatgaagcaacatctgca
ttggatacagaaagtgaaaagattgtacaagaagcattagacaaagcacgagaaggtcgt
acaagtatcataatagcacacagattgtcaactgttaaaaatgcagacattatcgcagtt
gttgacaagggcaaagttgtcgaaactggaacacatgaagaacttctaaagaagcgaggc
gcatactacagtttggtcaatgcccagctcacacatcagtag
DBGET
integrated database retrieval system
