Styela clava (leathery sea squirt): 120345462 Help Entry 120345462         CDS       T07291                                  Name (RefSeq) DNA ligase 4-like   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism sclv  Styela clava (leathery sea squirt) Pathway sclv03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:sclv00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     120345462  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sclv03400]     120345462 Enzymes [BR:sclv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      120345462 DNA repair and recombination proteins [BR:sclv03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      120345462 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_A_C BRCT_2 DNA_ligase_IV RNA_ligase mRNA_cap_enzyme DUF3887 Motif Other DBs NCBI-GeneID:  120345462 NCBI-ProteinID:  XP_039270853 LinkDB All DBs Position Unknown AA seq 929 aa AA seqDB search MTTPVAVDTTVASKVPFGQLCQLFERISRGKSNPVRREEFRNFVKKWREHHEKLHSKIIT NGSIPDDSFYPAFRLIAPQLDRERPSYGVKETLLAKLYIDVLGLSRTNPDAKKLLEYKNP KTNTLATGDFAEIAYIHILSKRCTTQGSLSIQQVNDNLDKLAMYNGERKKEQVQKTLMTL IQKTSASEQKWLIRILLKDTRLKIGQSVLMAEFHPDAEEVFNVTTNLRQVCMKLIDPSIR LSDTEIELFQPFRPMLALNAKLTEVENLMDHKPFYLEIKYDGERSQIHKEGLKYKYFSRS GREYSTVFGEDPYSGSLTPFIHDLFTPNVRSCILDGEMMGYDPGLNLFMQKGGQFDIKHV TEDHDLQPCFVAYDLLSLNGENLTSKPVAERMKKLESIFKPLEGRMQLAERKQVSTNQET LAYLNEAIDRREEGIIVKHPQAPYTPNKRKGSGWFKIKPEYVSGVVDDLDLVIVGGKFGD GRHGKLISKFMLAVRDDKSPNLIYKSLCMVGSGYTDKELSEITEKLKPHLRVFEKRKPPP WLIVTKEKPEVVVHPDNSVVVQVRATEITESTAYAAGCTLRFPRIVGTRDDKNAADAMDV TQLTELRNMAQGKLAARHATLTKEPSVKKRKIRVEPSAVVSARFQATNVMDVEQTSNSFE DFEFCVMSGVANNNKSSLEKKIASHGGSIVQNPSSETYCVIARDEKNVRVRNIIRSGKHD VVKVSWLLLCLEKGEIVPFMPEDMLFTSEKTKLKFADKFDKYGDEYTEDIDVEKLKQLFS KVENTEGYSSHFPPPDADDRLTVMQCCANDVSSRYHSYGFHDLKTSIFQGFHFYINDCLV VNDLTTQLKTSKWKEARSVSRFFSAILDDTISEKTTHVISDELSETIGNIDEIKNIRRSS KTKFHLVSIDWLFQCVKNGKVESERPYEI NT seq 2790 nt NT seq  +upstreamnt  +downstreamnt atgactactcctgttgccgtggataccactgttgcttcaaaagttcctttcgggcaactt tgccaattattcgaacgaataagtcgtggaaaatctaatccagtgaggcgtgaagaattc cgtaactttgtcaaaaaatggagagaacatcatgaaaaattgcacagcaaaattatcaca aatggatcaataccagatgattctttttacccagcttttagactcattgcaccacaatta gatcgggagaggccttcctatggagtcaaagaaaccctactggcgaaattgtatattgac gttcttggattatcaagaaccaacccagatgcaaaaaaattattggaatataaaaaccca aaaacgaatacattagctacaggagatttcgctgaaatcgcttacatccatatcttatca aaaaggtgcacaacgcaaggatctctctcaatacaacaagtcaatgataatttagataaa ctggcaatgtataatggcgaacgtaaaaaagaacaagtacaaaaaactctgatgaccctg atacaaaaaacatcggcttcagagcaaaaatggttgattaggattcttttaaaagacacg agactgaaaattgggcagtcagtactgatggctgaatttcaccctgatgcagaagaagtg ttcaacgtcactacaaatttacgacaagtttgtatgaaactgatagatccatcaattcgt ttatcagacacggaaattgaattgtttcaaccgtttcgtcctatgcttgctctcaatgca aagttgacggaagtagaaaacctgatggatcataaaccgttttatttagagataaaatac gacggcgaaagaagtcaaattcataaagaaggtttgaagtataaatatttttctaggagt ggccgagagtattcaactgtgtttggagaggacccatattcggggtctttaaccccattt attcatgatctgtttacccccaatgttcgttcttgtatattagatggggaaatgatgggg tatgacccaggtttgaatctttttatgcaaaaaggaggtcagtttgatatcaaacatgtt actgaagatcacgacctgcagccatgttttgtcgcctatgatttgctttctttaaatgga gaaaatttgacttcgaaacctgtcgctgagcgaatgaaaaaattagagtcaatttttaaa cctcttgaaggtcgaatgcaattggctgaaaggaaacaggtatcaaccaatcaggaaacg cttgcttatttgaatgaagcaattgatagacgtgaggaggggattattgttaaacacccc caagctccgtacactcccaacaaacgtaaaggtagtggatggtttaaaattaaacctgag tacgttagtggagtggtagatgaccttgatcttgttattgtcggaggaaagttcggggat ggccgacacggtaaattgatcagcaaatttatgttggccgtaagggatgataaaagcccg aatttaatttacaaatccttgtgtatggtcggatctgggtatactgataaagaattatca gagataactgagaaattgaaaccgcatttgcgagtttttgaaaagagaaaacctcctcca tggcttattgtgacaaaagaaaagccagaagtggttgttcaccccgataattctgttgtg gtacaagtacgagcaactgaaattactgagtccacagcatacgctgccggttgtacattg agatttccgagaatagttggaacacgagatgacaaaaatgcggcagatgctatggacgtc acgcaacttacggaattaagaaatatggcgcaagggaaattggcagcacgtcacgctaca ctgaccaaagaacccagtgtcaaaaaacggaaaattcgtgttgaaccatcggctgttgtt tctgcaaggtttcaagctactaatgtaatggatgttgaacagacttccaactcttttgaa gattttgaattttgtgtgatgtctggcgtagcgaataacaataagtcgtctttagaaaag aagattgcgtcacatggtggcagtattgttcaaaatccgagctcagaaacgtattgtgta attgctcgcgatgaaaaaaatgttcgtgtacgcaatattataagaagtgggaaacacgat gttgttaaagtttcatggttgttactttgcttggagaaaggagagattgttccatttatg ccagaagatatgcttttcacatctgaaaagactaaattaaagttcgcagataagtttgac aaatatggcgatgaatacactgaagatatagatgttgaaaaattgaaacaacttttttca aaagttgaaaatacagaggggtattcatctcactttcccccaccagatgcggatgatcgt ttaaccgttatgcaatgctgtgcaaatgacgtgtcgtctcgttatcattcgtacggattt catgatctaaagacttcaatttttcagggttttcatttttatataaatgattgcctcgtc gttaatgatcttactacgcaattaaaaacatcaaaatggaaggaggcgagatcagtttca cgattttttagtgcaattttggacgacacaatatcagagaagactactcatgtgattagt gatgaattatctgaaactataggaaatattgatgagattaaaaacatcagacgatcttca aaaacgaaatttcatttagtttcaattgactggttgtttcaatgtgtcaagaatgggaaa gtagaatcagaaaggccgtatgaaatttaa

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