Styela clava (leathery sea squirt): 120346870
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Entry
120346870 CDS
T07291
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120346870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120346870
04147 Exosome [BR:
sclv04147
]
120346870
04090 CD molecules [BR:
sclv04090
]
120346870
Enzymes [BR:
sclv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120346870
Transporters [BR:
sclv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120346870
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120346870
CD molecules [BR:
sclv04090
]
Proteins
120346870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_22
RsgA_GTPase
AAA_16
AAA_30
AAA_29
MeaB
AAA_15
DUF6625
Motif
Other DBs
NCBI-GeneID:
120346870
NCBI-ProteinID:
XP_039272606
LinkDB
All DBs
Position
Unknown
AA seq
1323 aa
AA seq
DB search
MLSNQVYLTFISGHQFKSKKVSWAKRSGNDVHEKPPLNGQKEWHVESTANTAKLSPVPTV
PFYSLFRFANGFDYFLLVIGSLASAIHGASLPLLFIFFGDLTNTFTSFGKFSSCNFNYTL
CTEALLFNGTESEFQIIAEQARDLTGNSIYSVYWFIYIGLGVFIVGSIQVTTFCFLAIRQ
TKRIRLAYVKSILRQDIGYHDVNSSGELNARLADDILKIQDGMGEKLSLLIQYICMVISL
VIVAFIYSWKLALVALSLTPMLVISTAMIFVLIKKYAGEEIEAYGSAGSIAEETISAIRT
VVSLGIQDEQSRRYSVNLTKAREMGIKKGTVLGLNMGFTYLTTFSVYAITFWYGVQLIID
ENDPLDPGDMMVVFFNVLLAALGLGAAGSNMEYISTAKVAGMKLFSVIERVPVIDIFSEK
GIKPENMEGNVVFKNVEFSYPSRPETQILKGVNFKADKGQTVALVGQSGCGKSTSISLIQ
RFYDVAGGAVMIDGNNVKNLNLRWLRDRIGIVAQEPVLFDTTIGENIRYGKQDVTDEEIH
KAAKLANADNFISALPKKYETLVGESGSQLSGGQKQRIAIARAIVRDPKIMLLDEATSAL
DTESEYIVQSALEKASAGRTTIVIAHRLSTIKNANKIIVFHDGQIVEEGTHDELLENHEG
AYSNLINSQMNNKTENSVESKNQGIICQRLTKLSSKTSARGRSNRNFKRRETQSIKSGNE
FSGNEETEEDVDEEEEEELPDAPISRIMKLNKPEAVYIGFGCFFSAVSGSLDPINALIFS
AVLTIFTEGNVEEQGHLSVLYSCLFLALGATAFISNTLEAIFFSKSGTELTIRLREKAFR
SVLRQDIAYFDDHRNNTGAVCMKLASDASRVQGCTGTHFGLLVKNFACLGVALGIAFAYS
WKLTLLTIAYIPLIVLGEFLKMKLLLGASEKEKQAFENANDIATEAISHIRTVASLANEA
KVFQTYTERLKEPFKSAVKKTVYTGIGYAFSQCLIYMTYAGIFRLGIELVESGEIPFEDV
FKVLFAVIFGARAAGQNSSYVPDYAEAKLSAARMFKLFDSEPTIPSHSDEGHKPHACKGN
IEFKSVHFTYPTRPDSTVLQGCNFSVSTGKTLALVGHSGCGKSTCIQLMERFYDATDGEV
TIDGNDIKKLNVSWARQQIGIVSQEPVLFDISIKDNILYGDITRTHTDEEIASAAADANI
HEFISSLPEGYDTKLGFKGRQLSGGQKQRIAIARALLGKPKLLLLDEATSALDTESEKVV
QEALDKARQGRTSIIIAHRLSTVMNADMIAVVDKGRVVETGTHNELLQHMGAYHRLVNAQ
LMS
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaaaccaggtttatttaacgtttatatctgggcaccaatttaaatcaaaaaag
gtatcatgggcgaagagaagcggcaatgatgtacatgaaaaacctcctcttaatggacag
aaagagtggcatgtggaaagtactgccaacacagcaaaactttcgccagtaccaactgtg
ccgttttatagcttgtttcgttttgcgaatggatttgattactttttgttggtgatcggg
agcctcgcgtcagctattcatggagcttctttgcctttgctattcatattttttggagat
ttgacaaacacctttacttcgtttggaaaattttcttcgtgcaacttcaattatacatta
tgcaccgaagctttgttattcaacggtacggaaagcgaatttcaaattattgccgaacag
gctcgagatttgactggcaactccatttattctgtttattggttcatatatattggattg
ggagttttcattgtgggatctattcaagttacaacgttttgctttctcgctatacggcag
acaaaacgaattcgcttggcatatgtcaaaagtattttacggcaggatattggatatcat
gatgttaattcttcaggagaattaaacgcgagactagcagatgacatcctgaaaatacaa
gacggaatgggagagaaattgtctttattaattcaatacatctgcatggttatttctttg
gttatcgtcgccttcatatattcttggaaactagcgcttgtggctttatctttgactccg
atgttggtgatctctacagcgatgatttttgttcttataaagaagtacgctggagaggag
attgaagcttacggctctgctggttcaatagcggaagaaactatttctgctattcgaacc
gttgtttcattaggaattcaagacgaacaaagcagaaggtattcagtgaatctgacaaaa
gcaagagaaatggggataaaaaagggaacagtgcttggactaaacatgggttttacttat
ttaaccacgttttccgtgtatgcaataacattttggtacggagttcaacttataatcgat
gaaaacgatcctcttgatcctggtgacatgatggttgttttcttcaacgttttactggct
gccttgggtttaggagcggctggaagcaacatggaatacatttcaacggctaaagtggca
ggaatgaaattattttcagtgattgaacgtgtaccagtgatagatatattttcagagaag
ggcataaaaccggaaaacatggaaggaaacgtagtatttaaaaacgttgaattcagctat
ccatctcgaccagaaactcagatattgaaaggcgttaatttcaaagctgacaaaggacag
actgtcgctttggtgggacaaagtggttgtggtaaaagcacatcgatcagcttaattcaa
cgattttatgatgttgcgggtggtgccgttatgattgatggaaataacgtaaaaaatctt
aatttgcgatggcttagagaccgtattggtattgtagcacaagaacctgtgctttttgat
acaactattggagaaaatataagatatggaaaacaggatgtaacagatgaagaaattcac
aaagctgctaaactggcaaacgcggataattttatcagtgctcttcctaagaaatatgaa
acacttgttggcgaaagcggtagtcagttaagtggtggacagaaacagcgaattgccatt
gctcgagcaattgttcgagatcccaagataatgctactggatgaggctacttcagccttg
gacaccgaaagcgaatatattgttcaatctgcgctggaaaaagcatctgcaggtagaacg
acgatcgttatcgcccatcgcttgtctacgatcaagaatgcgaataaaatcattgtattc
catgatggacaaatagtggaagaaggaactcatgatgaattactggaaaatcacgaagga
gcatattcgaatttaattaacagtcaaatgaacaataaaacggagaattcagtggagtca
aaaaaccaaggtataatatgccaacgtctaacgaaattatcttccaaaacgtcagccaga
ggacgctcaaatcggaatttcaaacgccgggaaacacagtctataaaatcaggaaacgaa
ttcagtggaaatgaagaaactgaagaagatgttgacgaggaggaagaagaagaacttccg
gatgctcctataagtagaataatgaaacttaacaaaccggaggctgtgtacattggattt
ggatgctttttctctgctgtctccggttctttggatcccataaacgctttgatcttctcc
gctgttttgacaatatttacagaaggaaatgtagaagaacaaggtcacttgtccgtgctg
tattcgtgtttgtttttagcgctcggtgcaactgcgtttatttcaaacacgttggaggca
atattcttctccaaatctggtacggaactaacaataagacttcgagaaaaagcatttcgt
tctgttcttcgtcaagatatcgcttactttgatgatcatagaaacaacacaggtgctgtt
tgcatgaagcttgcttctgatgcatcaagagtacaaggatgtactggaactcattttgga
ctgctggttaaaaattttgcctgtttgggtgttgcgttgggaattgcatttgcttatagt
tggaaattaacgttactgacaatagcctacatacctctcattgtacttggggaatttcta
aagatgaaattgttgcttggagcatcagaaaaggaaaaacaagcttttgaaaacgcaaac
gacatagcaacagaagctattagccatattcgtacagtagcttcactcgccaacgaagcc
aaagtttttcaaacttacacagaaagactgaaagagcctttcaagtctgcagttaagaaa
accgtctacactggtataggttacgcgttttctcaatgtctcatctacatgacctatgct
gggatttttcgcttaggtatcgaattagttgagagtggtgaaataccattcgaagatgta
ttcaaagtactttttgctgttattttcggagcaagagccgccggacaaaacagttcttac
gtaccagactacgccgaagctaaattatcagcggcaagaatgtttaagctatttgacagc
gaaccaactattccaagtcatagcgatgaaggtcataagcctcatgcttgtaaaggtaac
attgaattcaagtccgttcatttcacgtaccctactcggccagattcaactgttcttcaa
ggatgtaatttttcggtttcgactggtaaaacactagcattagttggtcattccggatgc
gggaaatcaacatgtattcaacttatggagagattttatgatgcgacagacggagaagtg
acaattgatggaaatgatatcaagaaacttaacgtatcttgggcaagacaacagattggt
attgtatcgcaagaaccagtgctttttgatataagcatcaaggacaacattttatatggt
gacatcacgcggacacacacagacgaagaaattgcatccgctgctgctgacgcaaacatt
cacgagtttatttcaagtttgccagagggttacgacaccaaacttggattcaagggcaga
cagttatcaggaggacaaaaacagagaattgctattgcgagagctttgctgggaaaacca
aaattactgttgcttgatgaagcaacctctgcgttggacacagaaagcgaaaaggtggta
caagaagcattggacaaagcaagacaaggtcgcacaagtattatcattgcacacagatta
tcaacagtcatgaacgctgacatgatagcagtggttgacaaaggaagggtcgttgaaacg
gggacacataatgagcttttacaacacatgggcgcctatcatcgcctggtcaacgcacag
ctaatgagttag
DBGET
integrated database retrieval system
