Schizophyllum commune: SCHCO_02483680
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Entry
SCHCO_02483680 CDS
T01331
Symbol
SCHCODRAFT_02483680
Name
(RefSeq) uncharacterized protein
KO
K18721
nucleoporin NUP1
Organism
scm
Schizophyllum commune
Pathway
scm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02483680 (SCHCODRAFT_02483680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02483680 (SCHCODRAFT_02483680)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SCHCO_02483680 (SCHCODRAFT_02483680)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
9595630
NCBI-ProteinID:
XP_003035857
UniProt:
D8PW04
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MSVDPPQRMYQPRAVTRDVSMQYTPTLPQHDHSMDIIDEPMRRSPSFRGSLPPTSSFRMR
MSATPQVEPIRESSMPPSLTDLNTNPAFVRAPSQGVESRQRLTPSNTLGTVAEQRHLFSP
TKSRSSLSYVFSAQETAPRAASGEAAQKALLELDAYKTPIIPSRRRKDTSDASALASTSR
PTTGPDLFKKKRKFVPMNEEEQLALNLTGQGKKKKKSKDKEARANDTKPYSKPDGLKKLM
TRHKAGEDPDASFESEGANELTRSDSQMDTSTGTTEKENKTNEPTVPDLPPQDNFAPRSA
DAPAQGSSLRIGRTKTSRQHLARPTIQRPLKKKFSAAFEDDDVDDDMEERNQEIEKLNEI
QAKAPPFKIDSNFFAKPPQAAPTSSDASKAKEPPVTSLPFSLGSPAPPAPKAPEPVKEAV
PAPAPEKPAPTPFSFSAPPKTDTPSASNGATSTSSSGGIPNFFSSSPALAKPLTLPTPTT
PLFGSPAATPKLDGAVPLPGTPKPAAPPAFSFGTPAPAEPVKDPNSPFWVGSKTAAAPAN
GSAASNGLPSGSLFGAPKVDEPPKSAPATTFSFEKKEEAPKSAAPTAAPFSFGKPAEPTK
PAESTSGLFGQPSTSSSTAGGLFGSTPAAPPATTVGFSFGAPAPATTPKPEEAPKPAPFS
FGAPAPAAEAPKPSTPFSFGQPAASSDSAPKPLFGAPASITEAPKPAFGAAPSVQAPKPL
FGAAPSADAPKPLFGSAPSSPAPFSFGQPAKTDAPAASPFSFGAAPSTPKPEEKKPAFSF
GAPAATPAAPAPFSFGSSTAAPATTEAPKPFSFGAPAPARPSTPPKNDDDGMRMEESPTR
EITKAEPSKLTLNTGGASFSFGGSTGGFGSASSTTAPSNPFAFGAPAASKPEENKPAFGG
FGQPAQTGFSFGQSKPAEAAEPQRPATTGSFGFGASTPTSSASPFAFGTPSSSNNANPFG
GASSQSGSAPNSPSTFHQPSPFSFGAPAPIQQTNSFSFGSQPASPAVPSATLPQPGTPSG
AFGASNAFSVASPTSPFTSAPNSAGTDGGGLFTMGSASSNAPPAPGPGGRPVRRLPTRRK
H
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgatcccccgcagcgcatgtatcagcctcgcgcagtcacaagagacgtgtcg
atgcagtatacgccgacccttccccaacatgatcactccatggacatcatcgacgagccc
atgaggcgttcgccatcgttccgcggatcgctgccgccgacctcctcgttccgtatgcgc
atgtctgccacgccccaagtcgagcccatccgcgaatcgtccatgccgccgagcctcaca
gacctcaatacgaatccagccttcgtacgtgcaccgtcgcaaggcgttgaaagccgtcag
cgcttgacacctagtaacacgctgggcacggtggccgagcaaagacacctcttctctcct
acgaagtcgcgcagctcattgtcgtatgtcttttctgctcaggaaaccgcgccgcgcgcc
gcttccggagaggccgctcaaaaagcgcttctcgagcttgacgcgtacaaaacacccatc
attccaagccgccgtcgcaaggacacatccgatgcctctgccctcgcaagcacgtctcgc
ccaacgactgggcctgacctcttcaagaagaagcgcaaattcgtgcccatgaacgaagaa
gagcaactcgctttgaacctgacaggtcagggcaagaagaaaaagaagagcaaggataag
gaggccagggcgaatgacacgaagccatactcaaagccggatggtctgaagaaattgatg
acccgtcacaaagccggagaggatcccgacgcgtctttcgagtccgagggcgccaatgag
ctcacgcgtagcgatagtcagatggacacgagcaccggcacgactgagaaggagaacaag
acgaatgagcccactgtgccggacctgccgcctcaggacaactttgcgccccggtctgcc
gacgcacccgctcagggctcgtcattgcgcattggacgcacgaagaccagcagacagcat
ctcgcacgcccaaccatccaacggcctctcaagaagaagttctcggcagcctttgaagat
gatgatgttgatgacgacatggaagagcgcaatcaagaaatagagaagctaaacgagatt
caggcgaaggcccctccgttcaagattgacagcaacttctttgcgaaaccgcctcaagcc
gcacctacttcgtcagatgcatccaaggccaaggagccgcccgttacgtcccttccgttc
tcgctgggctcaccggcaccgcccgccccgaaggccccagagccggtgaaggaggctgtt
ccagccccagctccggaaaagcctgcccccacccccttctcttttagtgcgccgccaaag
accgacacgccctcagcctcgaatggggcaacgtctacctcttcgtcgggcggcatcccg
aacttcttctcatcatcgcccgcccttgcgaaacccctcacactccctactcccaccacg
cctctctttggctcgcccgctgccactcccaagcttgatggcgctgtgcctctgcctggt
acgcccaagcctgcggcgccgccagcgttctcattcggcacgcccgcgcctgctgagcct
gttaaggacccgaatagcccattctgggtgggctccaagacggctgcagcaccagcgaac
gggtcggcggcctccaacggtctgccctcgggctcgctgttcggcgcgcccaaggtcgat
gaaccaccaaagtccgctcctgctacgacgttctcgttcgagaagaaggaagaggcgccg
aagtcggccgcacctaccgctgccccattctcgttcggcaagcctgctgagcccaccaag
ccggcggagagcacgagtggtttgtttgggcagccttcaacgtcgagctcgacagcgggc
ggtctgttcggtagtacgcctgctgcgccgcctgcaacgactgtaggcttctcgtttggt
gcgcctgcgcctgcgacgacgccgaagcccgaggaggcacctaagcccgcgccattctca
tttggtgcgcccgcccctgcggccgaggctcccaagccgtccactcccttctccttcggc
cagcctgcagcatcgtcggatagcgcgcctaagcctctgtttggtgcccccgcatcgata
acggaggcgccgaagccagcgttcggagctgcgccatccgttcaggctccgaagccactc
tttggcgctgcaccgtctgccgacgcgcccaagccgctcttcggttccgccccatcgagc
cctgcgccgttctcgttcggtcagcccgcgaagacggatgcgccagcggcgtcgccattc
tcgttcggtgctgcgcccagcacgccgaagcccgaagagaagaagccagcgttcagcttc
ggtgctccggcagcgacgccagctgcgcctgcgccgttcagcttcggatcctctaccgct
gcgcctgccacgaccgaggcgcccaagcccttctcgtttggtgcacctgctcctgcccgt
ccgtcgacgccgccgaagaacgatgacgatggcatgcgaatggaggagagcccgacgagg
gagatcaccaaggccgagccgtcgaagctcacgctgaacacgggcggcgccagcttctcg
tttggcgggagcaccggtggcttcgggtctgcgagctcgaccaccgcaccgtcgaaccca
ttcgccttcggtgcgcctgccgcaagcaagccagaggagaacaagcctgcgttcggtggc
ttcggtcagcctgcacagactgggttctcctttgggcagagcaagcctgcggaggccgcg
gagccgcagcggcctgcgacaactggatctttcggctttggcgcgagtacacctacttcg
tcggcgtcgcccttcgccttcggcacgccatcgtcgtcgaacaatgccaatcccttcggt
ggggcgtcctcgcagtcaggctcagccccgaacagcccgtcgacctttcatcagccttcg
ccgttcagctttggtgcacctgcgcctatccagcagaccaactcgttctcgtttggcagt
cagcctgcatcgcccgctgtgccttccgccacgttgccgcagccgggcacgcccagcggt
gccttcggagcctcgaatgccttcagcgtcgcgtcgccgacatcgcctttcacttccgca
cctaactctgctgggaccgatggtggcggtctgttcaccatgggctcggccagcagcaac
gccccgcccgcgcctggccctggtggaagacctgtccgtcgtctgcccacgcggcgcaag
cattga
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