KEGG   Schizophyllum commune: SCHCO_02626638
Entry
SCHCO_02626638    CDS       T01331                                 
Symbol
SCHCODRAFT_02626638
Name
(RefSeq) transcription factor Tfb2
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
scm  Schizophyllum commune
Pathway
scm03022  Basal transcription factors
scm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SCHCO_02626638 (SCHCODRAFT_02626638)
  09124 Replication and repair
   03420 Nucleotide excision repair
    SCHCO_02626638 (SCHCODRAFT_02626638)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scm03021]
    SCHCO_02626638 (SCHCODRAFT_02626638)
   03400 DNA repair and recombination proteins [BR:scm03400]
    SCHCO_02626638 (SCHCODRAFT_02626638)
Transcription machinery [BR:scm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SCHCO_02626638 (SCHCODRAFT_02626638)
DNA repair and recombination proteins [BR:scm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     SCHCO_02626638 (SCHCODRAFT_02626638)
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3 RPN6_C_helix
Other DBs
NCBI-GeneID: 9596223
NCBI-ProteinID: XP_050200134
LinkDB
Position
Unknown
AA seq 468 aa
MPSIIQEASSQPELASSVPHSLLPFLQSQPQNTLARLYQRPSSCLSIFRLLGPLERQIVM
NLLWLESAVPVSTMGAWVVREHQKIYEAALETLGKLHIVPTSPVKLAVHPTFKSSLRQAL
TGGGTQGSFGIPAEPDGKQQAPDVGKLDGYALERWETILHFMVSSGTGQESAQPAAGVTY
LLKESGLMESRGGTLRITSAGFQFLLLTPHAQLWELLIHYLRLQEANNIDLVEVLSFLFM
VSTTELGKEYSTENLSTSQLVVMDDLRHYGLLWQRKKNYPRFSPTRLATTLTSSAPPLPT
SSGPTSGPKEGFIVLETNYRVYAYTDNALQTAVLNLFITPKYRFPNLVVGSITRESVKRA
MSNGITADQIISYLITHAHPQMHKNNPLLPVTVQDQIRLWELERNRTKSQEGFLYTEFAS
QADYEYVLNYAKQLGVVLWENHAKRCFFAAQEGHANIKSFIERKRAGM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgccatccatcatacaggaggcttccagtcaaccagaactcgcgtctagcgtcccgcat
tctctgctgccttttcttcagtctcaaccacaaaataccctcgcacgactataccaacga
ccttcgtcatgtctttctatcttccgattgcttgggcccctcgagcgtcagattgttatg
aatcttttgtggcttgagtccgctgttccagtgtcgactatgggcgcttgggtcgtccgt
gaacaccagaagatctacgaggccgcattagaaacgctgggaaaattgcatatcgtccct
acgtccccggtaaaattggctgtacatccgacattcaagtcaagcttacgacaggcccta
accggagggggcacgcaagggagttttgggataccagccgaaccagatggcaagcagcag
gcgcctgatgtaggaaaactcgacggatacgcgctcgagcggtgggagacgattctccac
ttcatggtgtcctccggcacagggcaggagtccgcacaaccagctgccggcgtcacgtac
ttgttgaaggagagcggcctgatggagagccgagggggaacgctgcgcattacttcggct
gggttccagtttcttcttttgacgcctcacgcccagctttgggagctcttgatacactat
ctgcgtttgcaagaggccaataatatcgatctcgtcgaggtcctcagcttcctcttcatg
gtctcgacaacggaattgggcaaggagtactcgacggagaacctgagcaccagtcagcta
gtcgtgatggacgacctgcgtcactacggtctgttgtggcagcggaagaagaattatcct
cggttcagccccacgagactagcgaccaccctcacctcctccgcgcccccgttacccaca
tcctccggcccaacgtcaggccccaaagagggcttcatcgtccttgaaacgaattacagg
gtgtatgcatacacagacaacgcgctccagacggccgtcctgaatttgttcatcacgcca
aagtataggtttcccaacctcgtcgtcggatcgatcacgcgcgagagcgtcaagcgggcg
atgtccaatggcattacagccgaccagattatcagctacctgattactcacgcgcacccc
caaatgcacaaaaataaccctctgctacctgtcaccgtccaggaccaaatccgactctgg
gagctcgagcgcaaccgcacgaaatcacaggaggggttcttgtacacggagttcgcgtcg
caggcggactacgagtacgtcctcaattatgcgaagcagctgggggtcgtgctgtgggag
aaccacgcgaagcgctgcttcttcgccgcgcaggaaggtcacgcgaacatcaagtcgttc
attgaacgcaagcgggctggcatgtag

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