Snodgrassella communis: PYG29_05470
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Entry
PYG29_05470 CDS
T09364
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
scom
Snodgrassella communis
Pathway
scom01501
beta-Lactam resistance
scom02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PYG29_05470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PYG29_05470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scom02000
]
PYG29_05470
01504 Antimicrobial resistance genes [BR:
scom01504
]
PYG29_05470
Transporters [BR:
scom02000
]
Other transporters
Pores ion channels [TC:
1
]
PYG29_05470
Antimicrobial resistance genes [BR:
scom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PYG29_05470
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PYG29_05470
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PYG29_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PPTA
Motif
Other DBs
NCBI-ProteinID:
WMY90914
LinkDB
All DBs
Position
complement(1199649..1201058)
Genome browser
AA seq
469 aa
AA seq
DB search
MKTPLVKLLALTALSISVNGCIPRIPAIPATARVETPAQWHEHYPQTIQNIDAQWWTQLN
DPVLNQLINEALINNVDIALAQVRIQEALALEHASRASLLPSINASGGTTRQKSLNAFGV
ASITRVEQPTFQAAYELDIFGKNRNTFQASRLSRQATEMAAAATRISVITTTVKSYITLC
ALDEKLNLLQKTLNARQRELRIAESKANVGYTSQLELNQAQAEYAATLQQIPVIQSSISQ
QEHALSILIGSDSHIIERGLSLSQLHAPAIPAMLPSELMKNRPDIVQSSLLLAASDANLA
SAQAEFFPSVKISAIFGRVFSTAPIQEPVNIWSIGGSVLAPIFEGGKIQANFDLNVAKRN
EAAWNYRKTVLTALKEVEDQLSSSYHLQQQEQALEMERAALANALHHATNRYRSGYSPYL
DVLDSQRNLLSIESQLIQNKADYLNSQVSLYQALGGGWTMVKNLNIDKP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacccttagtcaaactattggcactgacagcactatccatcagcgtaaatggc
tgtattccacgcattcccgctatcccagcaacagcacgggtagagacacctgcacaatgg
cacgaacactatcctcaaacaatacaaaatatagatgcacaatggtggacacagctgaat
gatccggttttaaatcagcttatcaacgaagcccttatcaataacgtcgatattgctctg
gcacaagtgcgcatacaagaggctctggctctggaacatgcctcgcgtgcctcattgtta
cccagtatcaatgccagtggtggtaccacccggcaaaaaagcctgaatgcttttggcgta
gcgagcattaccagagttgaacagcctacttttcaggctgcctatgaactggatatattt
ggtaaaaatcgtaatacatttcaagccagccgcctgagccggcaggctaccgaaatggca
gcagcagctacccgcatcagcgtcattaccaccacagtcaaatcctatattaccctgtgt
gcactggatgaaaaactgaatctgctgcaaaaaacactgaatgcacggcagcgtgaactc
agaattgccgaatctaaggccaacgtcggttatacctcacaacttgaacttaatcaggca
caggctgaatatgcggctacactgcaacagattccagtgattcaatccagtatcagtcag
caggaacacgcactcagtatattgataggcagtgatagccatattatcgaacgaggctta
tctttgtcgcaactgcatgcaccggccattcccgccatgctgccttccgaactgatgaaa
aaccgccccgatatcgtgcagtcatcattgttactggccgccagtgacgccaatctggcc
tcagcacaggcagagttttttccatcagttaaaatcagcgccatatttggccgcgtgttt
tctactgctcccattcaagaaccagttaatatatggagtataggcggcagtgtactggcg
cccatcttcgaaggcggaaaaatacaggctaattttgacctgaatgtcgctaaacggaac
gaagcagcttggaattatcgtaaaaccgtgttgactgcgctgaaagaagtcgaagaccag
ctttccagcagctaccacttgcagcaacaggaacaggctctggaaatggaacgtgcagcg
ctagccaatgccctgcaccacgcaaccaatcgctaccgtagcggctattctccctatctg
gatgttttagacagccagcgtaatctgcttagtatagaaagccagcttattcaaaacaaa
gccgattatctaaactcacaagtttccctctatcaggctctaggtggtggctggacaatg
gtaaaaaatcttaatatcgataagccttga
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