Salinivibrio costicola: HBA18_02295
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Entry
HBA18_02295 CDS
T06511
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
scot
Salinivibrio costicola
Pathway
scot00540
Lipopolysaccharide biosynthesis
scot01100
Metabolic pathways
Module
scot_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HBA18_02295 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scot01005
]
HBA18_02295 (lpxC)
Enzymes [BR:
scot01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
HBA18_02295 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
scot01005
]
Lipid A
HBA18_02295 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QIR05310
LinkDB
All DBs
Position
1:454430..455347
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AA seq
305 aa
AA seq
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MIRQRTLKSIVETTGVGLHSGRKVTLTLRPAPANTGVIYRRTDMEPPVDFPADPADVRDT
MLCTALVNDEGVRISTVEHLSAAIAGMGIDNIIIEVNAPEIPIMDGSSSPFIFLLQSAGI
EVQNAPKRFIRIKKPVRIEDGDKWAELVPYNGFRLDFAIDFNHPAIESEQQNLVMDFSTQ
SFIKDISRARTFGFMRDIEYLQSQNLCLGGSFDCAIVLDDYRILNEEGLRFDNELVKHKV
LDAIGDLYMCGHSIIGEMRAYKSGHALNNQLLRAVLADQEAWEWVTFEETEKSPVAFADP
DMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgataagacagcgaacattaaaaagtattgtcgaaacgaccggtgtgggcctccactct
gggcgtaaggttacgcttactctgcgtccggctcctgcgaacaccggcgtgatttatcgc
cgtaccgatatggagccgccggttgactttccggctgatccagcggatgtacgcgacacc
atgctgtgtaccgcgctcgtcaatgacgaaggcgtgcgtatctcgactgtcgagcattta
agtgccgcgattgccggtatgggcatcgataacatcattatcgaggtcaatgcgccagaa
atcccgattatggatggtagctcaagcccattcatcttcttgctgcaatctgccggtatt
gaagtacaaaacgcaccaaaacgattcattcgcattaaaaaacctgttcgcattgaagac
ggcgacaaatgggcagagctggtgccgtataacggtttccgcctcgattttgccatcgac
ttcaaccatcctgcgattgaatcagagcaacaaaatttggtgatggacttctcgacacag
tcgtttatcaaagatatcagtcgtgcgcgaacatttgggtttatgcgcgacattgaatac
ctacaatcacagaacctgtgtttgggcggcagctttgattgcgccattgttctagatgac
taccgcatcttgaatgaagaaggtctgcgctttgataacgaattagtgaagcacaaagtg
ttggatgcaattggcgacctatacatgtgtggccatagcatcatcggtgaaatgcgcgcc
tacaaatcgggccatgcactgaacaaccagctgctgcgtgcggtgttggcggatcaagaa
gcgtgggagtgggtgacgtttgaagaaacggaaaaatcaccggttgcctttgctgatcca
gatatggtgcttgcgtaa
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