KEGG   Spiroplasma corruscae: SCORR_v1c08350
Entry
SCORR_v1c08350    CDS       T05302                                 
Symbol
rnj
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
scou  Spiroplasma corruscae
Pathway
scou03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scou00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCORR_v1c08350 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scou03019]
    SCORR_v1c08350 (rnj)
Messenger RNA biogenesis [BR:scou03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SCORR_v1c08350 (rnj)
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B_2
Other DBs
NCBI-ProteinID: ASP28607
UniProt: A0A222EQ06
LinkDB
Position
complement(989617..991338)
AA seq 573 aa
MEEIKFMALGGQDERGKNLFIVSVGEQLFIFDSGMKFPERSVLGIDVVIPNFDFLKENVK
KIKGIFISNPSSSNAGSISYILRDIDVPVYCNELTTIVLKYRNLKYRIKNRENNFKIIKD
KDVLKFDKDVSVEVFRTTSMFPESFGFAIHTKVGSIVYAGDYIMDGTEQSYFSTDMNHLT
QISKKGVLSLISDSEFASRNGYTVPNHRIEKFITGPMKDKKKRLILGLFEEDVFKLFEII
NQAKQNDRKIAIYGKTIAKVLESKTIQESLKFYEENIITTDEFMKSTDGILLITGAGDLL
YSRLAKIAAGNDDTVEFTENDTIILATPPSSGVEKRHAEILDELARTNAKLISLSDRNIW
TMRASYEDIKLMTRIMKPKSFIPVKGLHKDFLSAEQAAIEAGVIPENIALIKNGQVLKIN
HDGKLVISNQKIKNADIFVDGIGAGDIGAIVLNERKQLATDGAVIIGANLNDKTKELCSL
IDIQMRGVVYIVDDNPIFKLMQKQIVDILNKAREEWKIKPDSFDLNQIKKDIVSKVRSIL
RQETGKQPIVLVIVNELTNSNYEPKVRQKYNNT
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggaagaaattaaatttatggccttaggtggtcaagatgaaagaggtaaaaacctattt
atagttagtgttggggaacaattatttatttttgattcaggtatgaaatttcctgaaaga
agtgtattaggtatcgatgttgttataccaaactttgattttttaaaagagaatgttaag
aaaataaaaggtatatttatttcaaatccaagttcaagtaacgctgggtctattagttat
attttaagagatattgatgttccggtttattgtaatgaattaactacaattgttttaaaa
tatagaaatcttaaatatagaatcaaaaatagggaaaataattttaagataataaaagat
aaagatgttttaaagtttgataaagatgtaagtgtagaagtttttagaactacttcaatg
tttccggagtcttttggttttgcaattcacacaaaagtaggaagtatagtttatgctggt
gactatattatggacggtacagagcaatcgtatttctctactgatatgaatcatttaaca
caaatatcaaaaaaaggggttttatcattaataagtgattcagaatttgcgtcaagaaat
ggttatacagtaccaaatcatagaattgaaaaattcattactggtccaatgaaggataag
aagaaacgattaatacttggtttatttgaagaagatgtttttaaattatttgaaataatc
aatcaagcaaaacaaaatgatagaaaaattgcaatatacgggaaaacaatagcgaaagta
ctagagtcaaaaactatacaagaaagtttaaaattctatgaagaaaatattattacaact
gatgaatttatgaaatcaacagatggaatattgttaataactggtgcaggtgatttactt
tattcaagattagcaaaaatagcagcaggaaatgatgacacagtagaatttacagaaaac
gacacaattattttagcaacaccaccttcatctggtgttgaaaaaagacacgcagaaatc
ctagatgagttagccagaactaatgctaaacttatttctctatctgatagaaacatatgg
acaatgagagctagttatgaagatataaaacttatgacaaggataatgaaaccgaagtca
ttcattccagttaaaggtttacacaaagactttttatcagcagaacaagcagcaattgaa
gcaggagtgataccagaaaatattgcattgataaaaaatgggcaagttttaaagatcaat
catgatggtaagttagttatttcaaatcaaaaaattaaaaatgcagatatctttgtagat
ggaattggtgcaggagatattggcgctattgtcttaaatgagcgtaagcagttagctact
gatggtgctgtaattattggtgcaaatttaaatgataagactaaggaactttgctcatta
attgatattcaaatgagaggtgttgtttatattgttgacgataacccaatatttaaacta
atgcaaaaacagatagttgatattcttaataaagcaagagaagaatgaaaaattaaacca
gactcatttgacttaaaccaaataaaaaaggatatagtttcaaaggtaagatctattctt
agacaagaaactggcaaacaaccaatagtacttgtaattgtaaatgaattaacaaattct
aattatgaacctaaagtaagacaaaaatataataatacataa

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