Spiroplasma chrysopicola: SCHRY_v1c03360
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Entry
SCHRY_v1c03360 CDS
T02676
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scr
Spiroplasma chrysopicola
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scr03019
]
SCHRY_v1c03360
03009 Ribosome biogenesis [BR:
scr03009
]
SCHRY_v1c03360
Enzymes [BR:
scr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHRY_v1c03360
Messenger RNA biogenesis [BR:
scr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCHRY_v1c03360
Ribosome biogenesis [BR:
scr03009
]
Prokaryotic type
rRNA helicases
SCHRY_v1c03360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_7
AAA_19
Motif
Other DBs
NCBI-GeneID:
16152010
NCBI-ProteinID:
AGM24921
UniProt:
R4UHX3
LinkDB
All DBs
Position
367868..369247
Genome browser
AA seq
459 aa
AA seq
DB search
MGQFSNFGLKKFLNDGLIDLKFLEPTLVQEQVIPLLQKHQNVICLANTGTGKSHSFILPI
LNNLDYQLNRIQSVIVTPTRELAKQIYDNIRFFKTYQPELQVGCFIGGEDIKRQIEQLGK
SQPQIIVVTPTRLKDLFLADALNFGKLSSFIIDECDMIFDLGFIDDVDYILSKVNNNVKV
SVFSATIAESLKPFLLKYLKNPHFIDVNKTTVTNQNIEHVLIPTKHQDRGKVLLKVLAAI
NPYLCLIFVNRREEIPGYFDLLRENGYSVCQLHAGLEPRLRTQMVKRIKNLEFKYVIATD
VAARGIDLDGVSHVISIDLPNNLEYYIHRSGRTGRGQYTGKSYVLYDTKNLSFVKQLEQW
GITFEYQKWNSNNELVTVNLEAPRKKYQPQTTTNEVNKIINRYKTKNNNKKIKPGYKKKR
KEEIDNLTKQIRREHIKNSIKKIKKEKAKERGKKLFDKE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggacaatttagtaattttggattaaaaaaatttttaaatgatggattaattgatcta
aaatttttggaacctactttagttcaagaacaagtaatcccattattacaaaaacatcaa
aatgttatttgtttagctaatactggaactggaaaaagtcattcctttattttaccaatt
ttaaataatttggactatcagttaaatcggattcaaagtgtaattgtaactccaacccgt
gaattagctaaacaaatttatgataatattcgcttttttaaaacataccaaccagaatta
caagttggttgttttattggtggggaagatattaaacgtcaaattgaacagttaggaaaa
tctcaaccccaaataattgttgtaacgccaacgcggttaaaagatctttttcttgctgat
gctttaaactttggaaaattatcatcatttattattgatgaatgtgatatgatttttgat
ttagggtttattgatgatgttgattacattttaagtaaagtaaataataatgttaaagtt
tctgttttttcagcgacaattgccgaatcattaaaaccttttttattaaaatatttaaaa
aatcctcattttattgacgttaataagacaacagtaactaatcaaaatattgaacatgtt
ttaattccaacaaaacatcaagaccgtgggaaagtcttattaaaagttttagcagcaatt
aatccatatttatgtttaatctttgttaatcgtcgtgaagaaattccaggctattttgat
ttactgcgcgaaaatggttattcagtttgtcaattacatgcggggttagaaccacggcta
cgaacacaaatggtgaagcggatcaaaaatcttgaatttaaatatgtcattgcaacagat
gttgccgcgcggggaattgatttagatggggttagtcatgttatttcaattgatttacca
aataatttagaatattatattcatcggagtggcagaactgggcggggccaatatactggc
aaaagttatgtcttatatgataccaagaacttaagtttcgtaaaacaattagagcagtga
gggattacttttgaatatcaaaaatgaaatagtaacaatgaattagtaactgttaacctt
gaagcacctcggaaaaaatatcaaccccaaacaacaaccaatgaagttaataaaattatt
aatcgttataaaacaaaaaataataacaaaaaaattaaaccaggttataagaaaaaacga
aaagaagaaatcgataatttaactaaacaaatccgccgggaacatattaaaaattccatt
aaaaaaataaaaaaagaaaaagccaaagaacgaggtaaaaaattatttgataaagaatag
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