Streptomyces cyaneogriseus: TU94_08010
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Entry
TU94_08010 CDS
T03687
Name
(GenBank) pectate lyase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scw
Streptomyces cyaneogriseus
Pathway
scw00040
Pentose and glucuronate interconversions
scw01100
Metabolic pathways
scw02020
Two-component system
scw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TU94_08010
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TU94_08010
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TU94_08010
Enzymes [BR:
scw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
TU94_08010
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TU94_08010
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GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AJP01438
UniProt:
A0A0C5FUR1
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All DBs
Position
complement(2007709..2009736)
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AA seq
675 aa
AA seq
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MTHPTSKRPPAAGRTLAASLGLAGALALATAGQAQAAPAAAAGTGAARSAAAAGAGEGAA
GGRWTDVPHGFASLAGGTTGGAGGKVVTVTDQAGLAKYAAAEEPYIIRVRGSIAVEPFGA
DIAVASDKTIVGMGDTGEIVHGELHLAPGTHNVIIRNLTIRDSAVEGDWDCKDTDFDGIQ
MDTAHHVWVDHNRFSNICDGQLDIRKDSEYVTVSYNRFENNNKTFGIGWTSNVRTQITVD
HNWFADTKQRNPSVDNAAYAHLYNNYLTAQADPDDPVWTYGNWSRGKTRMVIENSYYRDV
QHPYQADATAELVERGSILQNTTGRHDEWGEAFDPHAFYAYRPDPAAAVPALVQRFSGPQ
KRVGDAVTLHVPADYPTVQAAVDAVPAGNDGRVVVAVAPGTYREKVFVPAAKPNISLQGT
GQKRSETVIVHDTPAAYGGSSGSATVRIAASDVTARNLTFANDFDEAAHELNGEQALAVK
TTGDRIVFEDTAFLGNQDTLMTDSPAPATVSRVYIRDSYIEGDVDFLYGRATTVVERGVI
KALSRGSATNNGYITAPSTWKGNPYGFLITRSRIVSDAPAGTFHLGRPWHPGGDPDAVGQ
VLIRDTWLPAAVKSAPWTDMSGFSWKDARFAEYRNSGPGAAVTADRPQLGAEEARAYTVA
AYLRGTDGWAPHTRH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacccacccgaccagcaagcgcccgcccgcggcgggaagaaccctggcagccagcctc
ggcctggccggcgccctggccctcgcgacggccgggcaggcccaggcggccccggccgcc
gcggccggcaccggggccgcccggtccgccgcggcggccggggccggcgaaggcgccgcg
ggcggccggtggaccgacgtcccgcacggcttcgcctcgctcgccgggggcaccaccggc
ggcgcgggcggcaaggtcgtcaccgtcaccgaccaggcggggctggcgaagtacgccgcg
gccgaggagccgtacatcatccgcgtgcggggctcgatcgcggtggagccgttcggcgcg
gacatcgcggtcgcctcggacaagaccatcgtcggcatgggcgacaccggcgagatcgtc
cacggcgagctgcatctcgcgcccggcacccacaacgtgatcatccggaacctgacgatc
cgcgactcggcggtcgagggcgactgggactgcaaggacaccgacttcgacggcatccag
atggacaccgcccaccatgtgtgggtcgaccacaaccgcttctcgaacatctgcgacgga
cagctcgacatccgcaaggacagcgagtacgtgaccgtctcctacaaccggttcgagaac
aacaacaagaccttcggcatcggctggacgagcaacgtcaggacgcagatcaccgtcgac
cacaactggttcgccgacaccaaacagcgcaacccgtccgtggacaacgccgcctacgcg
cacctgtacaacaactacctcaccgcccaggcggacccggacgacccggtgtggacgtac
gggaactggtcgcgcggcaagacccggatggtcatcgagaacagctactaccgggacgtc
cagcacccctaccaggcggacgcgaccgccgagctggtggagcgcgggtcgatccttcag
aacaccaccggccggcacgacgagtggggcgaggcgttcgacccccacgccttctacgcc
taccggcccgacccggcggcggccgtccccgcgctggtccagcggttctccgggccgcag
aagcgggtcggcgacgcggtgacgctgcacgtccccgccgactaccccaccgtccaggcg
gccgtggacgccgtgcccgccggcaacgacggccgggtcgtcgtcgccgtcgccccgggg
acgtaccgcgagaaggtgttcgtcccggcggcgaagccgaacatctcgttgcaggggact
ggacagaagcggtccgagaccgtcatcgtccatgacacgcccgccgcgtacggcggttcc
agcgggagcgccaccgtgcggatcgccgccagcgacgtcaccgcgcgcaacctcaccttc
gccaacgacttcgacgaggccgcgcacgagctgaacggcgagcaggcgctggcggtgaag
acgaccggcgaccggatcgtcttcgaggacaccgccttcctgggcaaccaggacaccctc
atgacggacagccccgcgccggccaccgtcagccgggtctacatccgcgactcctacatc
gagggagacgtcgacttcctctacggacgggccaccaccgtcgtcgagcgcggcgtcatc
aaggcgctgagccggggctcggccaccaacaacggctacatcaccgccccctcgacctgg
aagggcaacccgtacggcttcctgatcacccggtcgcggatcgtgagcgacgctcccgcc
gggaccttccacctcggtcgcccctggcacccgggcggcgacccggacgcggtcggccag
gtgctgatccgggacacctggctgccggccgcggtcaagtccgcgccgtggaccgacatg
agcggcttctcgtggaaggacgcccgcttcgccgagtaccgcaacagcgggccgggcgcg
gccgtcaccgccgaccggccgcagctcggtgccgaggaggcccgcgcgtacaccgtcgcc
gcgtacctccggggtacggacggctgggccccgcacacccgccactga
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