Shewanella cyperi: JYB88_00620
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Entry
JYB88_00620 CDS
T07829
Name
(GenBank) efflux RND transporter permease subunit
Organism
scyp
Shewanella cyperi
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QSX30217
UniProt:
A0A974XKQ9
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Position
complement(142508..145600)
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AA seq
1030 aa
AA seq
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MDLTTQSTRNPAATLVALLLILIFGVLAVAKLPIQLLPDIHQPQISVFNGWRAAAPQEME
SNIIEPQENVLRQVPGVEEMNSNISQGFGGITLTFEVGTNMQEAMINVINALNQTPPRPL
DANEPFINVGGGNNGVPNMASILIRTTADNPITDFSHYQKMIDDVVEPRLRQIAGVGGVQ
LQSRQAKELHIEFDPFRAAALGITLDELRATVSRAADISGGTADVGRRQYTVRFVGQYKP
ENLGNLIVTYNEGRPVHLSELAEVKIAAAEQQGFTKRNGFPAYYITVEGTFDANTVAVLD
GINVAIEELNREVLNKQGLVMELSFDASVHIKRAILLVQGNLGVGAALALLILFAFLRSW
RATLMIASTIPVALLIAFMALEVMGRTLNVISLAGLAFAVGLVLDAAIIVQENIIRLHRS
GEPLLSALLKGTAEVKGALLASTATTVAIFLPVLFMPGVEGQLFSDLALTLSVAVVSSFF
SAVTLIPVFNLLWLKLPEKDSGERFRHWLTAKVRALTGSRKLALFWCVTLIFGASALTLA
LMPRADFLPQARSDGIFTFFSLPPGASLETMEKELGETIIARLKPYYDKQQQPYIKGYNF
SVYGAFNVLFIYPEDPTRADEMIQVLKDKILIDLPDTQAYPSRGSLLQFGFNGGRAINVD
FHGPDMEALMEAAGQGMEIINQALPGAVVRPLPGLTMAQPELQLIPDERRLAQAGADRIQ
IANAVRAYTSGLFVGEYFDGNERMDVLLKGPKWTVPEQLAATPVYTRTAGIQTIGELTQL
HRTVGPTQLQRVNGKRTVSLLIFPPADMSLDEAMEVVQTQAMEKIRATLPADSSLGFRDS
ADRLDKTIRDMGTNFLLAVLILFLLMAALFKSAKDSLLVLLSMPMAICGGVISLRLLNLF
SFQSLDLLTMIGFIILLGLVVNNAILMVDQTRQGSRDGLALDEAIYQAVATRAQPVYMST
LTSIFGMLPLMLVPGVGSEIYRGLAAVIVGGMTASALFTLLLMPSLLRLTSSVSQTASSS
NSTRIAEVTP
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaccacccaaagtacccgcaatccggccgccaccctggtggcgctgctgctc
atccttatttttggggtactggcggtggccaagctgcccatacagctattgccggacata
catcaaccgcagatctccgtgttcaacggttggcgcgccgccgcgccccaggagatggaa
tccaatatcattgagccccaggaaaatgtgctgcgccaggtgccgggggtggaggagatg
aactccaacatttcccagggattcggcggtatcaccctgacctttgaggtgggcaccaat
atgcaggaggcgatgatcaatgtgatcaacgccctcaaccagacgccccccagaccgctg
gacgccaacgaaccctttatcaatgttggcggcggcaataacggcgtgcccaacatggcg
tcgatcctcattcgcaccacggcagacaacccgatcaccgatttcagccactaccagaaa
atgatcgacgacgtggtggaaccccgcctgcggcagattgccggggtgggcggtgtgcag
ctgcaaagccgccaagccaaggaactgcacatagagttcgatcccttccgtgccgccgcc
ctgggtatcaccctggatgagctgcgggccacagtatcccgcgccgccgatatttccggt
ggcacggccgatgtgggccggcgccagtacactgtgcgttttgtcggtcagtacaagccg
gaaaacctgggtaacctgatagtcacctataacgaaggtcgccccgtgcacctgagcgaa
ctggcggaagtgaaaattgccgccgcagagcagcagggctttaccaagcgcaacggtttc
ccggcctactacatcacggtggaaggcacctttgatgccaataccgtggccgtgctcgac
ggtatcaatgtcgccatcgaggagctgaaccgtgaggtattgaacaaacaagggctggtg
atggagctgtccttcgatgcctcggtccacatcaaacgcgccatcctgctggtgcagggc
aacctgggggtcggcgcggcgctggcgctgctaatcctgttcgctttcctgcgcagctgg
cgggccaccctgatgatagcctccaccattccggtggccctgctgatcgcctttatggcc
ctggaagtcatgggtcgcaccctcaatgtgatctccctggcggggctggcctttgccgtg
ggtctggtgctggatgccgccatcatagtacaggaaaacattattcggctgcaccgcagc
ggggagccgctgctgagcgccttgctcaagggtacggccgaggtcaagggtgccttgctg
gcgtccaccgccaccacagtcgccatcttcctgccggtactctttatgcccggcgtcgaa
ggccaactgttttccgatctggcactgaccctgtcggtggcagtggtttcttctttcttc
agcgccgtcaccctgatccccgtgttcaacctgctgtggcttaagctgccggaaaaggat
agcggagaacgcttcaggcactggctgacagccaaggtcagggccctgaccggctcccgg
aaactggcgctgttctggtgtgttactttgattttcggtgcatcagccctgaccctggcc
ctgatgcccagggccgacttcctgccccaggcccgttcggacggcatattcaccttcttc
tccttacctccgggtgccagcctggaaaccatggaaaaggaactgggcgaaaccatcata
gccaggctcaagccttactatgacaagcagcaacaaccctatatcaagggttataacttc
tctgtttacggcgccttcaatgtgctgtttatctatcccgaggatcccacccgggccgat
gagatgatccaggtgctcaaggacaagatactgatcgacctgcccgacacccaggcctac
cccagccgcggatccctgctgcaattcggtttcaacggcggccgggccatcaacgtcgat
ttccacggtcccgatatggaggccctgatggaagccgctggccagggcatggagataatc
aaccaggcactgcccggtgccgtggtgcgccccctgcccggcctgaccatggcccagccc
gagttgcagctcattccggacgagcgccgtctggcccaggccggtgccgaccgcatccag
atagccaatgcggtgcgggcctatacttccggcctgttcgtcggtgagtacttcgacggc
aacgaacgcatggacgtgctgctcaagggccccaagtggacagtgcccgagcaattggcg
gcaacgcctgtctatacccgcaccgccgggatccagaccataggcgagctgacccaattg
caccgcaccgtggggccgacccagctgcagcgggtcaatggcaagcgcacagtgtcactg
ctgatcttcccgccggcggacatgtccctggatgaggccatggaagtggtacagacccag
gccatggagaagatccgcgccaccttgcccgccgatagctcattgggcttccgcgacagc
gccgaccgcctggacaagacgatacgtgacatgggcaccaacttcctgctggccgtgttg
atcctgttcctgctgatggcggccctgttcaagtccgccaaggacagcctgctggtactg
ctgtccatgcccatggccatttgcggcggtgttatcagcctgcggttgctgaacctgttc
agttttcaaagccttgacctgctgaccatgataggtttcatcatcctgctgggcctggtg
gtcaacaacgccatactgatggtggaccaaacccgccagggcagccgtgacggcttggcg
ctggacgaagccatctatcaggccgtggcgacccgggcccaacccgtgtacatgagcaca
ctcaccagtatcttcggcatgttgccactgatgctggtgcccggtgttggcagcgagatc
taccgcggcctggccgccgtgatcgtgggcggcatgaccgccagcgccctgtttaccctg
ttgctgatgccaagcctgctgcgcctgaccagttcggtatcccaaacagcgtcttcttcc
aattcaacccgcattgccgaggtaacaccatga
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