Shewanella cyperi: JYB88_01930
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Entry
JYB88_01930 CDS
T07829
Name
(GenBank) PKD domain-containing protein
Organism
scyp
Shewanella cyperi
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
fn3
Reprolysin_3
Reprolysin_5
Pur_ac_phosph_N
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
QSX30441
UniProt:
A0A974XL78
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All DBs
Position
complement(436461..439403)
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AA seq
980 aa
AA seq
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MKYSTLPLTTLPLTTLVLLGLSLWPLTANSANPPPNQRIFPQLSLPTKAQGEQAIAALGV
KLPEVAAWYGMSPDEFARELRSDASLWLDTKGRAFYVDQFPQAADPADAQLLQEAPYPLE
DTFHLHSRPGANRVIYLDFDGHLTTGTAWNSSYGVDPIVSPPYSRDSDSSTFSTSELQDI
QNMWRQVAEDYAPFNVDITTEDPGLNAITRSSTSDQVYGTRVVVTKDNFAGCGCGGFAYL
TVFDDVGDYYKPAFVFNTSLVGAGEAISHEAGHNLSLSHDGVIGGATYYAGHGSGATGWA
PIMGVGYYQALVQWSKGEYLNANQTQDDIARIQTYGAPLVADDHGNSLATATELNASASN
GLLSLDGSGLIHSRQDVDLFRFHAGAGSYSIDVQPAPFAPNLDILAQLYDANGNLLASSN
PLDALTASLSGTLASAGDYFVKVDGTGKGDPLDTGYTDYASLGRYSISGTAVDGGTAAVP
TAAMALSYTPGPAPLSVNFDGSGSDDSDGTIMSYDWDFGDGTNTNGVQVSHVYQAPGDYI
VTLTVTDNDNLSDQASQVLSVQNLPPIAEGSADALSGTAPLTVNFDGSGSHDQDSSGTIN
GYQWDFGDGSGASGSNLDLASHSYTQAGSFTPTLTVTDNLGATNMATLTAVEVAPAPFLL
QYAGSETTAAGTVSGNMANLQADDGVLEIITERESGGRKSSRYSYLDHSWSFNVQSGNAV
TLVIHGWQSASSDGDQLRLYLTSSLATDVLLTQMPSSDQGTQSIPLPANLSGQVQISVRD
SDQTVGHLSLDSLYLDQLYIRTDNQSGGAVPAAPTNMAATSVSASQIDLSWSDNAGDELG
YSIERSQDGISWATVFTTGVDGSGHSDTGLTANTQYWYRVRAFNQNGNSGYSNEASATTN
PGTGLSLTASGYKVKGVQQVDLSWSGNNGDVDILRNGTKIATAPGSDYTDNLNLKGAGSY
DYQVCNTGSSDCSDTVTVIF
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcgactctgcctttgacgacactgcctttgacgacattggtgctccttggg
ctcagcctgtggccactgacggcaaacagtgccaatcccccgccgaatcagcgcatcttc
ccacagctgtcactgcccacaaaagcccagggcgaacaggccatcgcggccttgggcgtc
aaactgcccgaggtggcggcctggtacggtatgagcccggatgagtttgcccgcgagctg
cgcagcgatgccagtttgtggctcgataccaagggccgcgccttctatgtggatcagttt
ccccaggcagccgatccggccgatgcccaattgctgcaggaagccccctatccgttggaa
gacaccttccatcttcacagccgcccaggcgccaatcgggtgatttacctggacttcgac
ggtcatctcaccacgggcacggcctggaacagctcctatggcgtcgatcccatagtctcg
ccaccctacagccgcgactcggactccagcaccttcagtacatcagagttgcaggacata
cagaacatgtggcgccaggtggccgaagactacgcccccttcaacgtggatatcaccacc
gaagatccgggcctcaacgccattacccgcagcagcacgtcggatcaggtctacggaacc
cgggtggtggtcaccaaggacaactttgccggttgcggctgcggtggttttgcctacctg
acggtatttgatgatgtgggcgactattacaaaccggcctttgtgttcaacaccagtttg
gtgggtgccggggaagccatctcccacgaggcggggcataacctcagcctgagccacgac
ggtgtgattggcggtgccacctactacgccggccacggcagtggcgccaccggctgggcc
cccataatgggggtgggttattaccaggccctggtgcagtggagcaagggcgaatacctc
aacgccaaccaaacccaggatgatatagcccgcatccaaacctacggcgcgcccctggtg
gccgacgatcacggcaacagcctggcgaccgccacagagctgaatgccagcgcaagcaat
ggcctcctcagcctcgatggcagcggtcttatccacagccgtcaggatgtggacctgttc
cgcttccatgccggcgcaggcagttacagtatcgatgtgcagcccgccccctttgccccc
aatctggatattctggcccagctctatgatgccaatggcaatctgctggccagcagcaat
ccgctcgatgccctgaccgccagcctgagtggcaccctggccagcgccggggactatttc
gtcaaggtggatggcacaggtaagggcgacccgctcgacacaggctacacagactatgcc
agtctgggccgttacagcatcagcggaactgcggtcgatggcggcactgccgccgtcccc
acagcggccatggccctgagttacaccccgggccccgcccctttaagcgtaaactttgac
ggctcgggttcggacgacagtgatggcactatcatgagctatgactgggacttcggtgat
ggcaccaacaccaacggagttcaggtcagccatgtctaccaggcacccggtgattacatc
gtaaccctgacggtcacggacaatgacaacctcagtgaccaggccagccaggttttgagc
gtgcaaaatctgccgccgatagccgagggctctgccgacgcgctttccggcacagcgccg
ttaactgtcaacttcgatggttcgggctcccatgatcaggacagctccggcactatcaac
ggctatcaatgggactttggtgatggcagcggtgcttctggtagcaatttagaccttgcc
agccacagctatacccaggccggcagtttcacccccacgctgacggtcacggataacctg
ggtgcgaccaacatggcaacactaacggccgtagaagtggcaccggcccccttcctgctg
caatatgccggcagcgaaaccacggcggcgggcacggtaagcggcaacatggccaatctg
caggccgatgacggcgtgctggaaatcattaccgagcgggaatccggcggcaggaagagc
agcaggtacagctatctggatcacagctggagcttcaacgtccaaagcggcaatgccgtc
accctggtgatccacggttggcagtccgcgtccagcgatggcgatcagctgcggctgtat
ttaaccagcagccttgcgaccgatgtgttgctgacccaaatgcccagcagcgatcaaggt
acgcaatccatacccttgccggccaacctcagcggtcaggtgcaaatcagcgtgcgcgac
agcgaccagacagtaggccatctgtcactcgacagcctgtacctggaccagctctatatt
cgcaccgacaatcagagcggcggtgctgtgcctgcggcgccgaccaatatggcggccact
tcggtctccgccagccagatagacttgtcctggagcgacaatgcaggcgatgagctgggc
tacagcattgagcgctcccaagatggcattagctgggcaactgttttcaccacgggtgtg
gatggcagcggccacagcgacacggggctgaccgccaatacccaatattggtatcgcgtc
cgcgcctttaatcaaaatggcaattccggctattccaacgaggccagcgcgaccacgaat
ccgggtaccggcttaagcctgacggccagcggttacaaggtgaagggcgtgcaacaggtg
gacctgtcctggagcgggaacaacggtgatgtggacatacttcgcaatggcaccaagata
gcgacggctcccggcagcgattacaccgacaacctcaacctcaagggcgccggcagctac
gactatcaggtctgcaacaccggcagcagcgattgttcggacacagtgacggtcatcttt
taa
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