Shewanella cyperi: JYB88_02405
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Entry
JYB88_02405 CDS
T07829
Symbol
rsmE
Name
(GenBank) 16S rRNA (uracil(1498)-N(3))-methyltransferase
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_02405 (rsmE)
Enzymes [BR:
scyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
JYB88_02405 (rsmE)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB88_02405 (rsmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QSX30534
UniProt:
A0A974XUG7
LinkDB
All DBs
Position
complement(567097..567828)
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AA seq
243 aa
AA seq
DB search
MRVPRIYQPFPLSPGAELALDEDGAAHIGRVLRMGPGEQLCLFNGDGKDYLAEITEAGKK
SVTVRVLSEQTNESESPLHLHLGQVISRGDRMDFTLQKSVELGVNTITPLFSERCGVKLS
GERLDKRIQQWQKIVISACEQSGRSTVPEVRPAMELADWCAENTTALKLNLHPRAAHGIN
GLPLENKRIRLLIGPEGGLSAEEIAMTENHAFTDVLLGPRVLRTETAALTAITALQLRLG
DLG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgccacgtatttatcaaccctttcccctgagccctggcgcagaactggccctg
gatgaggacggtgcggcccacataggtcgggtgctgcgcatggggccgggtgagcagttg
tgcctgttcaacggcgacggcaaggattatctggccgaaatcaccgaggccggtaagaaa
tccgtcactgtgcgggtcctgtccgagcagaccaatgagtccgagtcgcccttgcactta
cacctgggacaggtgatttcccgcggcgatcgtatggattttaccctgcaaaaatcggtg
gagcttggggtcaacaccattaccccgctgttttccgaacgctgcggcgtcaagctcagc
ggtgagcgcctggataaacgtatccagcagtggcagaagatagtcatcagcgcctgtgaa
caatcgggccgcagcacagtccccgaagtcagaccggcaatggaattggctgactggtgc
gccgaaaacaccacggcgctcaaactcaatctgcatcccagggcggcacacggtatcaat
ggtctgccactggagaacaagcgcatccgcctgttgatcggcccggaagggggcctttct
gccgaggagatagccatgacagagaaccacgccttcaccgacgtattgcttggcccccgg
gtgttgcgtaccgaaaccgccgccctgaccgccattacagccctgcagctcagacttggc
gatctgggctga
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