KEGG   Shewanella cyperi: JYB88_11600
Entry
JYB88_11600       CDS       T07829                                 
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
scyp  Shewanella cyperi
Pathway
scyp00521  Streptomycin biosynthesis
scyp00523  Polyketide sugar unit biosynthesis
scyp00541  O-Antigen nucleotide sugar biosynthesis
scyp01100  Metabolic pathways
scyp01110  Biosynthesis of secondary metabolites
scyp01250  Biosynthesis of nucleotide sugars
Module
scyp_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    JYB88_11600 (rfbC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JYB88_11600 (rfbC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JYB88_11600 (rfbC)
Enzymes [BR:scyp01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     JYB88_11600 (rfbC)
SSDB
Motif
Pfam: dTDP_sugar_isom Peptidase_M1 Nudc_N
Other DBs
NCBI-ProteinID: QSX28902
UniProt: A0A975AJ42
LinkDB
Position
complement(2676879..2677427)
AA seq 182 aa
MRIIPTAIPEVVLIEPRVFQDKRGYFMESWNQATFDALIGETRFVQDNYSRSQKGTLRGL
HLQRNHPQGKLIWVLSGTIFDVAVDMRPGSATFGQWTGHILSADNPRQLWIPEGFAHGFY
VLSEFADVLYKCTDFYHPEDELTLHWQDPKLAIDWPLDANPIVSAKDLQGMDFSAAVEKL
SE
NT seq 549 nt   +upstreamnt  +downstreamnt
atgagaattatcccaacagctattcctgaggtagtgttgattgaacccagagtcttccaa
gacaagcggggttatttcatggagagctggaatcaggcaacttttgatgcgctgattggg
gaaacccgctttgtgcaggacaattattcccgctctcagaaaggaacgctcagaggcttg
catcttcagcgcaaccaccctcagggcaaattgatttgggtgttgtccggtactattttc
gatgtggccgtggatatgcgcccgggttctgcgactttcgggcagtggaccggacacatt
ttgtctgctgacaatccccggcagctctggatcccggaaggctttgcacacggtttttat
gtgttgtcagaattcgccgatgtactttataagtgtacagacttttatcatcccgaagat
gaattgactttgcattggcaggacccaaagctcgccatcgactggcccttggatgccaac
ccgatagtgtccgcaaaagatttgcaaggtatggatttttctgccgcagtggaaaaactg
tccgaatga

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