Shewanella cyperi: JYB88_11680
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Entry
JYB88_11680 CDS
T07829
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00521
Streptomycin biosynthesis
scyp00523
Polyketide sugar unit biosynthesis
scyp00541
O-Antigen nucleotide sugar biosynthesis
scyp01100
Metabolic pathways
scyp01110
Biosynthesis of secondary metabolites
scyp01250
Biosynthesis of nucleotide sugars
Module
scyp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JYB88_11680 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JYB88_11680 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JYB88_11680 (rfbC)
Enzymes [BR:
scyp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JYB88_11680 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QSX28918
UniProt:
A0A974XKI2
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All DBs
Position
complement(2693733..2694284)
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AA seq
183 aa
AA seq
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MKVIDTKIPDVKIIEPQVFGDDRGFFMEAWNQNRFEELVTGKPTQFVQDNHSKSIKGVLR
GLHYQVAPFAQAKLVRCVVGEVFDVAVDLRTTSPTLGQWVGIKLSAENKRQLWIPEGFAH
GFLTLSDTAEFLYKTTEFYSSNSERGIKWDDNTINIDWGVGDSEIVLSEKDKFNSSFNGA
ELF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatagatacaaaaattccggatgtaaaaatcatcgaaccgcaagtatttggt
gatgatagaggcttctttatggaggcgtggaatcagaatcgatttgaagaacttgtgacc
ggaaagcctactcaattcgtacaggataaccattcaaagtcaattaaaggtgtcctaaga
ggtttacattaccaagtagctccttttgcacaagcaaagctagttcgttgtgtagttggt
gaggtcttcgatgtggccgtagatttgaggacgacctctccaacattaggacaatgggtt
ggaataaaactttcagcagaaaacaaacgacagttgtggattcctgaaggttttgcgcat
ggttttttgacattaagtgatacagcggaatttttgtacaagaccacggaattttattct
tcgaacagtgaaaggggaataaagtgggacgataatactatcaacatcgattggggtgtc
ggcgactcagaaattgttttgtctgaaaaagacaagtttaattccagctttaatggtgca
gagttattttaa
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