Scytonema sp. HK-05: SAMD_12350
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Entry
SAMD_12350 CDS
T09974
Name
(GenBank) homoaconitate hydratase family protein
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00290
Valine, leucine and isoleucine biosynthesis
scyt00660
C5-Branched dibasic acid metabolism
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
scyt01210
2-Oxocarboxylic acid metabolism
scyt01230
Biosynthesis of amino acids
Module
scyt_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
SAMD_12350
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
SAMD_12350
Enzymes [BR:
scyt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
SAMD_12350
4.2.1.35 (R)-2-methylmalate dehydratase
SAMD_12350
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Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
BAY43655
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All DBs
Position
complement(1430735..1432057)
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AA seq
440 aa
AA seq
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MGMTLVEKILAKASGRSVVEPGENIWVNVDVLMTHDVCGPGTIGVFKREFGADAKVWDSE
KIVLIPDHYIFTADERANRNVDILRDFAKEQSIKYFYDITDRANFKANPDYKGVCHVALA
QEGHTRPGEVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMRFVLDGE
MPPYLLAKDLILQIIGDISVAGATYRTMEFSGEAVEQMTMEERMTLCNMVIEAGGKNGTI
APDETTFEYLRGRTNKPFESVYTDSDAKFYSQHRYDVSKLEPVVAKPHSPDNRALARECS
DVKINRVYIGSCTGGKTEDFFHAAQVLKGHKVKVPTYIVPATQKVYEDLFTLKYEEQTLS
EIFLDAGCIEPAAPSCAACLGGPKDTFGRMNEPEICVSTTNRNFPGRMGHKEAGVYLASP
YTAAASAVTGYVTDPREFLS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgacccttgtagaaaaaattttggcaaaagcctccggtcgatcagtcgtcgaa
ccgggggaaaatatctgggttaatgttgatgttttaatgacacacgatgtttgtggaccg
ggaaccatcggcgttttcaaacgcgagtttggtgctgatgccaaagtctgggactccgaa
aaaatcgtgttaattcccgaccattatattttcaccgccgacgaacgagctaaccgcaac
gttgatattttacgtgattttgctaaagaacaaagtataaaatacttttacgacattact
gaccgtgccaactttaaggcaaacccagactacaaaggcgtttgccatgtcgccttagcc
caagaaggtcacacccgcccaggtgaagtcttatttggtaccgactcccacacttgtaac
gctggtgcttttggtcaatttgccacaggtatcggcaacacagacgctggcttcatcatg
ggaactggcaaactgttaatcaaagttcccgccaccatgcgctttgtattggatggcgaa
atgcctccttacttgttagcgaaagacctgattttgcaaataatcggcgatatcagcgtt
gctggggcaacctatcggacgatggaatttagtggcgaagccgtcgaacaaatgacgatg
gaagaacggatgaccttgtgcaacatggtgattgaagctggcggcaagaatggtaccatt
gctcccgatgaaaccacatttgaatatttaagaggacgtaccaacaaaccttttgagtca
gtatacacagactctgatgccaaattctacagtcagcatcgctatgatgtctccaaacta
gaaccagtcgttgccaaaccccactcccccgataaccgcgctttggcacgcgaatgcagc
gatgtcaagattaaccgagtttatatcggttcctgcacgggcggcaaaacagaggacttt
ttccatgcagcacaagttctcaaaggtcacaaggtgaaggttcccacctacatagtaccc
gccactcaaaaagtctacgaagacctgtttacattgaagtacgaagagcaaaccctctcg
gaaattttcttagatgctggttgcattgaaccggctgcgccttcctgcgccgcttgcttg
ggtggtcccaaagacacctttgggcggatgaatgagccagaaatttgcgtttctaccacc
aaccgcaacttccctggacgtatggggcataaagaagctggagtttatcttgcttcgccc
tacaccgccgcagcttctgcagtcactgggtatgtgacagatccgcgtgagtttttgagt
taa
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