Streptomyces sp. CFMR 7: ABE83_10840 Help Entry ABE83_10840       CDS       T04074                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism scz  Streptomyces sp. CFMR 7 Pathway scz03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:scz00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     ABE83_10840  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:scz03400]     ABE83_10840 Enzymes [BR:scz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      ABE83_10840 DNA repair and recombination proteins [BR:scz03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      ABE83_10840 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol Motif Other DBs NCBI-ProteinID:  ALC27531 UniProt:  A0A0M5IW68 LinkDB All DBs Position 2737089..2737988 Genome browser AA seq 299 aa AA seqDB search MTPITEVEGRRLSLSNLDKVLHPATGTTKGEVLHYYAATAAGAILPHLRDRPVSFLRYPD GAGAQVFVTKNPPPGTPDWVRTTPVPRSEDPGARQVMVQDLASLMWAANLVVEFHTPQWR ADAPEIADRMVFDLDPGSPATVVECCAVACWLRERLAADGLFAYGKTSGSKGLHLLVPLE PAPAAEVSAYARRLAVEAEDALPDLALHRMKRALRPGKVFVDFSQNSASKTTATPYTLRA RAEPTVSAPVTWDEIEGCRAPEALVFRADDMAGRLERYGDLLGPLLDPDRARPLPPGPG NT seq 900 nt NT seq  +upstreamnt  +downstreamnt atgacgccgatcacggaggtggaggggcggcgcctctcgctgagcaatctcgacaaggtg ctccatccggccaccggcaccaccaagggcgaggtgctgcactactacgcggccacggcg gcgggcgcgatcctgccccatctgcgcgaccgcccggtctccttcctgcgctatccggac ggggccggggcgcaggtcttcgtcaccaagaatccgccgcccggtacgcccgactgggtg cgcaccacccccgtcccccggagcgaggacccgggcgcccggcaggtgatggtccaggat ctggcctcgctgatgtgggcggccaacctggtggtggagttccacaccccgcagtggcgg gcggacgccccggagatcgcggaccggatggtcttcgacctggacccgggctcccccgcg accgtcgtggagtgctgcgcggtggcctgctggctgcgggagcggctcgccgccgacgga ctgttcgcgtacgggaagacctccggctccaaggggctgcacctgctggtcccgctggag ccggccccggccgccgaggtgtccgcgtacgcccggcggctcgcggtggaggcggaggac gccctgcccgacctggccctgcaccggatgaagcgcgccctgcggccgggcaaggtcttc gtcgacttcagccagaactccgcgtcgaagaccaccgcgacgccctacaccctgcgggcc agggccgagcccaccgtctccgcgccggtcacctgggacgagatcgaggggtgccgggcc ccggaggcgctggtgttccgggcggacgacatggccgggcggctggagcggtacggggac ctgctgggccccctcctcgacccggaccgggcccggcccctgccgccgggtccgggctga

DBGET integrated database retrieval system