Streptomyces sp. CFMR 7: ABE83_16780
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Entry
ABE83_16780 CDS
T04074
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 subunit
Organism
scz
Streptomyces sp. CFMR 7
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ALC28578
UniProt:
A0A0M4DHW9
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Position
4023181..4025307
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AA seq
708 aa
AA seq
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MSGNEQQEEPLDGIAAAGGGTKADGMPSGQVPAQAGRGPSDGESEGGTVLPGPWPSVAGD
ETSGAGAGGGGEGIGTYAVPSQREGRSGAPDVGLSDAQLIEGMRDGDNLAYEELFRRHSG
AVRRYARTCCRDGHTADDLTAEVFARTLQAVRGGKGPQEAVRAYLMTAVRHVAAAWTKSA
KREQLVDDFAVFAAQASRTSELSDDDTLDLGADVLAMHEAEQSMAMAAFRSLPERWQAVL
WHTTVEEESPSEIAPLFGLTANATAVLASRAREGLKQAYLQAHVSQALTTGGDCAQYADR
LGAYARGGLRMRAERGLRKHLDECAKCRVAAGELQHVNAGIPALLPIAVIGWFAAGYSLK
AAGVVAGGAMGAAGAGAAAAATGGGASSGAAAGSAAAGSTAGSAAGGAAGGSSAGSAGGA
AASEGLGAPAKAGIAAAVAVAAAAGLVWALVGDDTPKPEPEPVAKPPAVAPADPSPEPPA
PEPEPPAAPGPVPPASSDPEPQPDPAEPEPPAPEEPAPSPPPRAEPTPTPSPEPPEPAPP
APSPPPSPQPTPSPDPPPPPPPAPTVYQVSELPYSLFGDHTEPEVVMGQSSWIWQRSNVA
IDGRRYAHGVTVHGRSSVTIQLNRPCTRYEAMVGVDDLSLGLGAVRFSVYNGDGARLWRS
PVMEGGDPAVPVSVGIGGQSSIRLVVEPEGALGSVALADWAESRISCA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtaacgagcagcaggaagagccgctcgacgggatcgcagcggcgggtgggggc
acgaaggccgacgggatgccctccgggcaggtgccggcccaggcgggacgcggtccgtcg
gacggcgagtccgagggcgggaccgtgctgcccgggccgtggccgtccgtcgccggggac
gagacctccggcgcgggtgccggtggcggcggtgagggcatcggcacgtacgcggtgccg
tcgcagcgcgagggccgcagcggggcccccgatgtcgggctctccgacgcccagttgatc
gagggcatgcgcgacggggacaacctcgcctacgaggagctgttccggcgccactcgggc
gcggtccgccggtacgcccgtacgtgctgccgggacgggcacaccgccgacgacctgacc
gccgaggtgttcgcgcgcaccctccaggccgtacggggcggcaaggggccccaggaggcc
gtgcgggcctatctgatgaccgccgtccgccatgtcgccgccgcctggacgaagagcgcc
aagcgggagcaactggtcgacgacttcgcggtcttcgcggcgcaggcctcgcgcacctcg
gagctgtccgacgacgacaccctcgacctgggcgccgatgtgctggcgatgcacgaggcc
gagcagtcgatggccatggcggcgttccggagcctgccggagcggtggcaggcggtgctc
tggcacaccacggtggaggaggagtcgcccagcgagatcgccccgctcttcggcctgacc
gccaacgccaccgccgtcctggccagccgggcccgcgaagggctcaagcaggcgtatctc
caggcccatgtgagccaggcgctcaccaccgggggcgactgcgcgcagtacgcggaccgg
ctcggcgcctacgcccggggcgggctgcggatgcgggccgagcgcgggctgcgcaagcat
ctcgacgagtgcgcgaagtgccgggtggcggcaggcgagctgcagcatgtgaacgccggg
atcccggcactgctgccgatcgcggtcatcggctggttcgccgccgggtactcgctcaag
gcggccggtgtcgtggcgggcggggccatgggcgccgccggggccggagccgccgccgct
gcgaccggcgggggcgcgtcctcgggtgcggccgccggatcggcggccgccggaagcact
gcgggaagcgctgcgggaggtgccgcgggcgggtcgtccgcgggttcggccgggggtgcc
gccgcctccgaggggctcggcgcccccgcgaaggccgggatcgcggccgccgtcgccgtg
gccgccgctgccggtctggtgtgggcgctcgtcggtgacgacacgccgaagccggagccc
gagccggtcgccaagcccccggcggtggcgcccgccgacccgtcgccggagccgcccgcg
cccgaaccggagccgccggccgcccccggtcccgtaccgcccgcctcatccgacccggag
ccgcagccggaccccgcagagccggagccaccggcccccgaggagccggccccgagcccg
ccgccgcgcgccgagcccacgcccaccccctccccggagccgccggagcccgcgcccccc
gcgccgagcccgccgccgtccccgcagcccaccccgagcccggatccgccgcccccgccg
ccgcccgccccgaccgtctaccaggtcagcgagctgccgtactccctgttcggcgaccac
accgagccggaggtggtgatggggcagagcagctggatctggcagcgttcgaacgtggcg
atcgacggcaggcggtacgcgcacggggtgaccgtgcacggccggtcctccgtcaccatc
cagctcaaccgcccctgcacccgctacgaggcgatggtcggcgtggacgacctgtcgctg
gggctcggcgcggtccgcttctccgtctacaacggggacggggcgcggctgtggcgctcc
cccgtgatggagggcggggaccccgccgttccggtcagcgtcgggatcggcggccagtcg
tcgatccggctcgtggtggagcccgagggagcgctcggctcggtggccctggccgactgg
gcggagtcccggatcagctgcgcctga
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