Saccharophagus degradans: Sde_1346
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Entry
Sde_1346 CDS
T00335
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sde02044
]
Sde_1346
02035 Bacterial motility proteins [BR:
sde02035
]
Sde_1346
Secretion system [BR:
sde02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Sde_1346
Bacterial motility proteins [BR:
sde02035
]
Pilus system
Pilus assembly proteins
Sde_1346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
ABD80608
UniProt:
Q21L21
LinkDB
All DBs
Position
1742450..1743652
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AA seq
400 aa
AA seq
DB search
MSQYKFKAMDVNGKIRQGVLHASNVFDVEHQLNTQNYDLISCQEVKVKKYRPFDTKLQRR
DLINMVFQLEQLTKSGVSLLEGLKDLRDSVPESYFKDVLAGLVESIEGGKTFSESLKNFP
NDFDTVFVSLVEVGEESGELAKILKDMGETLRWTDEIVAATVKIIMYPAIVALVVFCVTA
FLMIYLVPKIIPFVEEMGGDIPFHTVALIAFSDFFIHYWWLIISTPIVITVVIKKLAKTR
PSLRYQLDRLKLNLPIIGEINFKLKVARMTNYMALMYSAGITVLRALEISKPLVSSDVLS
GAIDDVYDQIAEGNSISDSFARTEIFPPLVVRMVRVGETTGNLDEALLNVSYFYNREVKE
AIDKIEPAISPILTVVMGTLLGWIMLSVLGPVWDAVSKVG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtataaatttaaagcaatggatgtgaatggcaagatcaggcagggcgttttg
catgccagtaacgtattcgatgtagagcatcaactcaatacgcaaaattacgatttaata
tcctgccaagaggtaaaagtaaaaaaataccgcccgttcgatacaaagctccagcgcagg
gaccttattaatatggtgttccagctagagcagcttacaaaatcgggggtgtcgctacta
gaagggttaaaagacctgcgcgacagtgtgcccgagtcctactttaaagatgttttagcg
ggattggtagagtcgatcgaagggggaaaaactttctccgaaagtttaaaaaactttcct
aacgattttgatacagtgtttgtgtcgttagtggaggttggcgaagaatctggcgagctg
gcaaaaatactaaaagatatgggtgaaactctgcgttggacagatgaaatagttgctgcc
accgttaagattattatgtatcccgctattgtggcgctagtagtattttgtgtaaccgca
tttttaatgatttaccttgtgccaaaaattattccttttgtggaggagatgggcggggat
ataccttttcacaccgttgcgcttattgcattttccgatttctttatacactactggtgg
ttgattatatctacccccattgtgattacagtagttattaaaaaactagcaaaaacacgc
cctagtctgaggtatcagcttgatagattaaagcttaatttacctatcataggtgaaatt
aactttaagcttaaagttgcgcgtatgacaaattatatggcgcttatgtattcagccggc
attaccgttttaagagcactagaaattagtaaacctttggttagtagcgatgtgctttcc
ggcgcaattgatgatgtgtacgatcaaattgctgagggtaatagtattagtgatagtttt
gctagaaccgaaatatttcctcctctggttgttagaatggtgcgggttggcgaaaccacg
ggcaatttagatgaagcgttgttgaatgtaagttacttttataatcgagaagtaaaagag
gcaattgataaaattgaacccgctattagccctattttaactgttgtaatgggtacgcta
ctcggttggattatgctctcagttctcggccccgtatgggacgccgtatccaaggtgggc
taa
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