Saccharophagus degradans: Sde_3447
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Entry
Sde_3447 CDS
T00335
Symbol
pes8A
Name
(GenBank) pectin methylesterase-like protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sde
Saccharophagus degradans
Pathway
sde00040
Pentose and glucuronate interconversions
sde01100
Metabolic pathways
sde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Sde_3447 (pes8A)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sde_3447 (pes8A)
Enzymes [BR:
sde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Sde_3447 (pes8A)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Trypan_PARP
DUF1349
3keto-disac_hyd
Motif
Other DBs
NCBI-ProteinID:
ABD82702
UniProt:
Q21F27
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All DBs
Position
4386669..4389914
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AA seq
1081 aa
AA seq
DB search
MTKRTLSALLALCATLTACGGGDITSGGDAIPAVNQPAPVQEPEPEPEPQPEPEPEPEPE
PEPEGAWTCPETGFYFCDDFEDGTFDDKWDDLIATYDLPSPGVFDILDEASGKSLRFTAG
TRGGDLADGELIVVKDTAFENVTNADYSLEYRIRPRNNGNTGNKYLHAMSRYEGPKEYYF
GGLSMQGSTASTQVEAGFVLPENTTSISNRLVQAKYPLELGTTGMSDGYWYEVRFDMIGN
TGTIYLDGEPQGSFTDADGLYPLTGKIGFMTYNRSFEIDWVRVGDPAIKPVQLSLDYASP
LWEAAADQDPLNVTVTAIQSDGVTADTFTAVSSDTNVVTTSIANNVVTITPVAQGSATVT
FTAGSDANRVKTIDVEIARAFVMSTTDYGDIASKVTPTVGMTDANPDAHLSITFDSAPTL
SGVGSIRIYNAADDSEVDVIRLTDESDALGYAGQANKRELNTTPVYLDGNTLHVSPHSNA
LAYGQDYYVAIGDNVLTGATLNTIAFDGLGKNAGWTFSTKASAPTGNTVTVDDDASADFS
TVQGALNYAMANTTDDSITINIANGNYYEPLYLAERNNVTLKGESRDGVVIHYNNHEAMN
GGSTGRANFYVANSDMLTLETLTLKNGHQRTGGGDQAETIYFNSSSNTDRLIAKGAAFIS
EQDTLLLKGYNWFYNSLVVGNVDFIWGYSAVTLFEETEIRSIADSKPGAGDSGGYILQAR
TPLETDLGFVFLNSELTKATGVNGNEIGDGKTYLARSGGSTGYFDNISFINTKMGSHIAD
IGFAYADINGQPAPNPAVATADAGWREFGSMDSAGTALDVSARCGDSGSCIQLTQAQVDA
QYCNRAQIFASWNDWTGWDPLPEDTSDDACADPVIPGAVTWTGIAMSLGGSTTSVSGNIT
EQTDSNITFTADGGKFESSKLSTYFAYQELTGDFVISAKAKTIGLLRENGSYQFPTGILM
CVCDAAAATTGLMGHASLNDITVDTTVNLVATYGHIQTTAGSWNKTGTTDVTAGDNLYIQ
LERAGNSYTARYSTDGGATYSNIGGSSFTDTLPDTLKVGFFATPNNTGEQTFVYEDIQIT
Q
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacgaactctatctgcgttgttagccctgtgcgcaacattaacggcttgcggt
ggtggcgatataaccagcggcggcgatgctataccggcagtaaaccaacccgccccagta
caagagcctgaacctgaacctgaaccacaaccggaacccgaacccgaacccgagcccgag
ccagaaccagagggcgcgtggacctgcccagaaacaggcttctacttctgtgacgacttt
gaagacggcacgtttgatgacaagtgggacgatctcattgccacatacgacctaccaagc
cctggtgtattcgacatattagacgaagcaagcggcaaatctttgcgctttacagcaggc
acccgtggcggtgacttagcagatggcgaacttattgttgtaaaagatacagcattcgaa
aatgtaaccaacgcagattactccttagagtaccgtattcgcccgcgcaacaacggcaac
acaggcaacaagtacctgcacgctatgtcgcgctacgaaggccctaaagaatattacttt
ggcggtttaagcatgcaaggctctactgcaagtacgcaagtagaagcaggtttcgtattg
ccagaaaacaccactagcattagcaaccgcttggtgcaggccaagtacccgttagagcta
ggtacaacaggcatgagcgacggctactggtacgaagtacgcttcgatatgataggcaat
acaggcaccatttacctagatggcgaaccacaaggcagctttaccgatgccgatggcctt
tacccattaacaggtaaaattggctttatgacttacaaccgctcattcgaaattgattgg
gtgcgagtaggcgacccagctattaagcctgtacaactttcactggattacgccagcccg
ctatgggaagcagcggcagaccaagacccgctaaacgtaacagttactgccatacaaagc
gatggcgtaacagcagatacctttaccgcagttagcagcgataccaatgtagtaaccaca
agtattgcaaataacgtagtaaccattacccctgtagctcaaggtagtgccaccgtgacc
tttaccgctggttcagatgctaatcgcgttaaaacaattgatgtagaaattgcacgcgcg
tttgttatgtctactaccgactacggcgatatagcttctaaggtaacaccaactgttggt
atgactgacgccaacccagacgcacatttaagcattacattcgatagcgcacctacccta
agcggtgttggctctatacgtatatacaatgcagcagacgatagcgaagtagatgttatt
cgccttaccgacgaaagtgatgcattgggttacgccggccaagccaacaagcgtgaatta
aataccacaccggtttacttggatggcaacaccctacacgttagcccacacagtaacgca
cttgcctacggccaagactactacgttgccattggcgataacgtacttaccggcgcaaca
ctaaacaccattgcgtttgatggtttaggtaaaaacgcgggttggactttctctaccaaa
gcctctgcccctaccggcaacaccgtaactgtagacgacgatgcaagtgcagatttcagc
acagtacaaggtgcgttgaactatgctatggcaaataccacggacgattcaatcaccatt
aacattgctaacggcaactactacgagccgctatatctagcagagcgcaacaacgtaacg
ctaaaaggtgaaagccgcgacggcgttgttattcattacaacaaccacgaagccatgaac
ggtggcagcactggccgcgcaaacttctatgttgccaactcagacatgctaaccctagaa
acgctaacccttaaaaacggtcatcagcgcactggtggtggcgaccaagcagaaactatc
tacttcaatagcagcagcaataccgatcgcttaattgccaaaggcgctgcttttattagt
gaacaagatacgctgttacttaaaggctacaactggttctacaactcgcttgtggtaggt
aacgtagactttatttggggctacagcgcagtaaccttgtttgaagaaacagaaattcga
tctattgccgactctaaaccaggtgcgggcgactcgggtggctatattctgcaagcgcgt
acgccactagaaacagaccttggctttgttttcttaaatagcgaattaacaaaagctacc
ggcgtaaacggtaacgaaattggcgatggcaaaacctaccttgcgcgcagcggcggcagc
acgggttacttcgataatatttcgtttattaacaccaaaatgggtagccatattgccgac
ataggcttcgcctacgccgacattaacggtcaacctgcccctaacccagcggtagctact
gctgacgcaggctggcgtgaatttggcagcatggattctgcaggcacggctctagatgta
tctgcacgctgcggtgatagcggcagctgtatccaacttacgcaagcacaagtagatgcg
cagtactgtaaccgcgcgcaaatttttgctagctggaacgattggacaggctgggacccg
ttgccagaagatacctctgacgatgcctgtgctgaccccgttatacctggtgcagtaacg
tggactggcattgcaatgagccttgggggttctacaacatctgtttccggcaacattacc
gagcaaacagacagcaatattacattcactgcagacggcggtaagtttgaatcgagcaaa
ctttcaacttacttcgcttatcaagaattgactggcgactttgtaattagcgccaaagct
aaaaccattggcttactgcgcgaaaacggcagctaccagttccctacaggcatattgatg
tgtgtttgcgatgcggcagcggcaacaactggcttaatgggccacgccagcctcaatgac
attacagttgatactactgtgaatttagttgccacctacggccacattcaaaccacagct
ggtagctggaataaaactggaacgactgacgtaaccgctggcgacaacctgtatatacag
ctagagcgcgcaggtaatagttataccgcacgctactcgactgatggcggtgccacctat
agcaacattggtggcagctcatttacagacacccttccagacacacttaaagtgggtttc
ttcgctacgcctaacaacaccggtgagcaaactttcgtttacgaagatatacaaatcact
cagtaa
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